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Simple sequence repeat (SSR)
>UN64167
GGAACCAATCTGATATTCGGACACGACCCCCTTTTTTCTCTCTGCCTTTTTAGTTTAACCCTAGTTTTTGAGGGTTGTTCGGTTTCGATCTGCA
GATTCTTTATTGAGAAGCTTCAGTTCACGAAAATCTTGGTCGGAAGGTGTGATCTTCTCGATGTCTGTGCTAGGTTAATGTTAAGCTCTGATTA
AAATTAAATCTGCTGGTTAGAGATTTTGTTGGTTCTTTAATGGCTGAGGTGGGAAAAGTCTTGGTTAGTGACAACAATTCAAGCGAGGCTAAAG
CATCTGATGCTGCTGTTACTTCCACTGATAAAATAGAGGCTAAACCGGTGGCTACTGTAACTAGAACTGAAACTGAGCAATGTTCTTCAGCCGA
GATTCCGGAATCTACGGACAGCAAGAAGCTTGTTCCAGCCTCGGTGTCTGAAGAAGAAGAAGAAGTAGTTGTTGCTTCGGAGAAAGCAGTCTGG
TCCGGAAGGGAGTAGTAGCCCGTTTATCCGGGAGAAAGTCATGGAAGACGGATACAACTGGAGGAAGTACGGACAGAAACTTGTTAAAGGGAAT
GAGTTCGTGAGGAGCTATTACAGGTGCACGCACCCTAACTGCAAAGCCAAGAAGCAGTTGGAACGGTCTCCAGGTGGACAGATCGTGGATACTG
TTTACTTTGGTGAGCATGATCATCCAAGCCTCTCGGTAGTGCTGCTGCTGTTCTTCATCAGATAGACGAGTGA |
Primers for UN64167 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTTAATGGCTGAGGTGGG |
60.066 |
20 |
ACCAGACTGCTTTCTCCGAA |
59.989 |
20 |
250 |
222 |
471 |
2 |
CTTTAATGGCTGAGGTGGGA |
60.066 |
20 |
ACCAGACTGCTTTCTCCGAA |
59.989 |
20 |
249 |
223 |
471 |
3 |
TGAGGTGGGAAAAGTCTTGG |
60.081 |
20 |
ACCAGACTGCTTTCTCCGAA |
59.989 |
20 |
239 |
233 |
471 |
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