Simple sequence repeat (SSR)
>UN64208
GGAAGACCATGTGCTCACTCACATGCGGTCTTCTCTTCTTCCCCTTTCTTAATTTTTATTTTCCTCTGCATTGATTAGCTCAGAACTTCACAAC
CCCAACAGACAAACAAAATCAACAAGTAGAAGTAACAAAGAAACAAGGACAAGAAACCGGAAGATTCGTACGGTTTCATCTCTCTCTACACTTT
GTTCAAGAGAGAGAGAGATTAAGGAAAGGATCCAAAAATGAAGGAAGGAAACGACGGGTTTGTCCGAGCAGATCAGATTGATCTAAAGAGCTTA
GATGAGCAACTAGAGAGACATTTAAGCAGAGTTTTGACTTTAGAGAAGACGGAGTCAGAGGAAGTTGTCGCTGCTGGGGAAGTTGCCGCCGAGA
AGGCCGAGGAGTAAAGACGAAGAAACAATATGTATTTTCTATCGTTGTTTGGTCTCATTTCGTTGTTTTAAAAAGATCACTTCGCAAAATTTCA
TAAGTATTTTCTATCGTGTGTTATGATGAAATGATATTTGGTTATGATGAAATGATATATTTGGGAGTTTTGCTGGTTG |
Primers for UN64208 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCACAACCCCAACAGACAA |
59.976 |
20 |
CAATCTGATCTGCTCGGACA |
59.942 |
20 |
182 |
87 |
268 |
| 2 |
TCACAACCCCAACAGACAAA |
59.976 |
20 |
CAATCTGATCTGCTCGGACA |
59.942 |
20 |
181 |
88 |
268 |
| 3 |
CGGTCTTCTCTTCTTCCCCT |
59.811 |
20 |
CAATCTGATCTGCTCGGACA |
59.942 |
20 |
243 |
26 |
268 |
|
|
