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Simple sequence repeat (SSR)
>UN64346
GGGGACGAGGAGAAGAAGAAGAAGGGCCCCAATATAGTCGTCTCCGCCCCTGATTCTTTCTTCAACTTGATATTCCATTCAACTCGTAGTAAAA
AAGATAGAGCCACCTGCATTTGGCTTTCTTCTAATCTGGACCAGTTGATCGAACAATCATGGAATGAATGACTTGTTGTAGTAAATCATCCACA
CAAATCTCATCAGCTTAATAATTTTTTTATTTATTTTTGGAATGGCTGAGGCTGATCCAGACTCCTCAGATACGTCTGATCTCAAACCCATTAC
CAGCAGCGCCCCACTCTTTAGCATCCCTCACTTTTTTGTCGCTAAAGACACTGATGCAGCAGGGAGGAGCCCTACTTCTCCTCTTGATTTTTCA
CTCTTTGGTGGCCTCTTTAGCCCCAGGTCTCCTCCAGCTGCTGCTGCTGCTGCTGCTCCCCTCTCATCTCCCAGGTTTCGTAACAGATGGGCTT
TTGACAAAGTCGGCCTCTCTCTTCTAAGCTCCAGCGTTGGAGAAGAAGAAGGGGGCATGAGGAGGGTGGTTTATTCAACAACATCGTGCTTGCC
CCTCAAATCAAGCCTAGCTGTTTGGTTCTTGTGTTAAATCCAATTCCTTGCCTAAAACTATGCACCCCCTTCCATGTCTTCGACGCGGCGGAGA
TCCTCTTCCGTGTGATTCAATCACTGGTGTTTGGAGACATGACTCTCCAGAGTCAGCTCATCTCTGTGATATATGCAGTCAGCTATCTCGCTCG
CTCTCTGCACGTGAGATGCAC |
Primers for UN64346 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGCTGATCCAGACTCCTCAG |
59.945 |
20 |
CGACTTTGTCAAAAGCCCAT |
60.11 |
20 |
245 |
238 |
482 |
| 2 |
AGGCTGATCCAGACTCCTCA |
59.945 |
20 |
CGACTTTGTCAAAAGCCCAT |
60.11 |
20 |
246 |
237 |
482 |
| 3 |
TCACTCTTTGGTGGCCTCTT |
59.844 |
20 |
CCCCCTTCTTCTTCTCCAAC |
60.045 |
20 |
152 |
374 |
525 |
|
|
