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Simple sequence repeat (SSR)
>UN64597
GACAGACAAAACCCTTTCCTCCTCCCATTTCATCGCAGAGAGAGAGAGAGATTCAGACACAAAAAATGCTTCTCAAATCAGCTTCTGCTTTCAC
CCTCGTGAACATCCATGGAGTCGAGAAGGACATCTCTCCTCTCTTCTCCTCCTCCTCCTCGAGTCTTCCCGTTTCTTCGGGAAAATCACGAAAC
CTCTCCTTCTCTGTTTCTGCCTCAAAGGCTACCACCACCACGACGCAGACCCTAAGCGGCGTCGTTTTCGAGCCGTTTGAGGAGGTGAAGAAAG
AGCTCGATCTCGTCCCTTCGAGTCCACAGCTCTCGCTCGCTCGCCATCTGTACTCTCCCGAATGCGAAGCCGCCGTGAACGAACAGATCAATGT
GGAGTACAACGTGTCTTATGTGCATCACCCTTGTACGCTTACTTCGATCGTGATAACGTTGCTCTCAAAGGTCTTGCCAAGTTTTTTAAGGACT
CGAGTGTGGAAGAACGTGACCACGCTGAGATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCCTATGGTGATACCTCA
GTCTGAGTTTGATCACGCTGAGAAAGGTGATGCTCTCTACGCCATGGAGCTGGCTCTGTCATTGGAGAAGCTGGTCAATGAGAAGCTCCTCAAC
GTGCACAGTGTGGCTTCGAA |
Primers for UN64597 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACAAAACCCTTTCCTCCTCC |
59.415 |
20 |
TTCTTCACCTCCTCAAACGG |
60.224 |
20 |
275 |
6 |
280 |
2 |
ACAAAACCCTTTCCTCCTCC |
59.415 |
20 |
GTGGTAGCCTTTGAGGCAGA |
60.397 |
20 |
218 |
6 |
223 |
3 |
ACAAAACCCTTTCCTCCTCC |
59.415 |
20 |
GTGATTTTCCCGAAGAAACG |
59.546 |
20 |
178 |
6 |
183 |
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