 |
Simple sequence repeat (SSR)
>UN00558
GGAGCTCGCTCTCACAGTAGCCCTAATAAAAAGAAAGAGCCCCCCCATATTCGATAACAACTTTGCTTCTCTTCCTTTCTCGTTTCTGATCCGT
AACCCTAAATTATCCACATCCGCCGCATCATCAGATCCTTCTCCTTCCATCCGTTCCGTCGACACTCCCAGCTGAAATCGCCGAATTCCGTTTC
CGAGTTCTCATAAAAACCGAACCTTTTTAGCTGTCACTACCTGAATCGGAGGTTGTTGTTGTTGTTGTTTGAGATAAGATGGTGGGTGGTGGAA
ACAGGAGAGACGAAGGATCGATGCCGATTCAGAACACCAACTTGTTCGCCGCTTTGGATACTCGGAGTAAGAAGAAGAAGTCGTCGTCCGACAA
GAGCAAAGGACGTCAAGATCCGGTGAAGGAGGAGCCTGAGCCGCAGGTCTTCTGGTCTCCTACGCCTCTCAAAGCCAAGGCTTGGGCGGATATC
GACAGCGACGATGAAGATGATGACTATTTCGCCACCACTGCTCCTCCCAAGGCCTTGTGGAGTGCCTCTGAAGCTTCCCGTTCCGATGCGAAAG
AGGTTCAAGTTGAGGAAAGTGAGAGTGAAGAAGACATTCTTGACGAAGGTGATGATGATGATGATGATTTGGAGGAGGAGCATGAGACGCAAGT
TCATCCAGAAGCAGAGCCTGAAGTGAAGAAGGCTCCTGAAGTTCCTGCACCACCCAAGGAGCCAGAGAGGCAGCTTTCCAAGAAAGAGCTGAAA
CAGAAGGAACTTGCTGAGTTTGAGCTTTGTTAGCAGATTTTGGAATTGCACCAAGAGATATGCG |
Primers for UN00558 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCTCGCTCTCACAGTAGCC |
59.921 |
20 |
TCCACCACCCACCATCTTAT |
60.05 |
20 |
279 |
3 |
281 |
| 2 |
ATCCTTCTCCTTCCATCCGT |
59.896 |
20 |
TCCACCACCCACCATCTTAT |
60.05 |
20 |
153 |
129 |
281 |
| 3 |
ATCCTTCTCCTTCCATCCGT |
59.896 |
20 |
GCATCGATCCTTCGTCTCTC |
59.917 |
20 |
178 |
129 |
306 |
|
|
