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Simple sequence repeat (SSR)
>UN65102
GGGTGCTCTCTCTTCTCACTCAGAGGAGGGTAAAAGCTCTAACCTTTTTATCTCTGTGATGGGTGGTTTAATCGATCTGAACGTGACGGAGGAG
GAGGAAGACGAGACGCTCTCATCGGCTTCTGGGTCGCTCTCTCCTTCTTCTAATTCGTCTTCCTCAGCGGCGTTTGGTTTTGGTGTGAGTGGGT
CTTCTTCTTCTTCTTCTGGGGTTTGTCTGGAGCTGTGGCACGCTTGTGCTGGACCACTCATCTCTCTCCCGAAAAGGGGAAGCCTTGTTTTGTA
TTTCCCTCAGGGACATTTGGAACAACAAGCCCCCGCCGCTGTTTACGGCCTTCCTCCTCCTCCTCCTCACGTGTTCTGTCGTATTCTTGATCTC
AAGCTTCACGCAGAGACAGATACTGATGAAGTTTATGCTCAAGTCTCTCTTCTTCCTGAGTCAGAGGACATTGAGAGGAGAGTGCGTGAGGGAA
TGATAGATGTTGATGGTGGAGATCAGGAAGATTACGAAGTGCTTAAGAGGTCTAATACTCCTCCTCACATGTTCTGCAAAACCCTCACTGCTTC
TGATACAAGCACCCATGGTGGCTTCTCTGTTCCTCGCCGTGCTGCCGAGGATTGCTT |
Primers for UN65102 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCTGAACGTGACGGAGGAG |
60.261 |
20 |
ACAAAACAAGGCTTCCCCTT |
59.976 |
20 |
207 |
75 |
281 |
| 2 |
TAATTCGTCTTCCTCAGCGG |
60.344 |
20 |
ACAAAACAAGGCTTCCCCTT |
59.976 |
20 |
137 |
145 |
281 |
| 3 |
ATCTGAACGTGACGGAGGAG |
60.261 |
20 |
GGGCTTGTTGTTCCAAATGT |
59.836 |
20 |
240 |
75 |
314 |
|
|
