 |
Simple sequence repeat (SSR)
>UN65600
AAAACATTAAATGATTCATATATTACTTAGATATAAGGGATAACCAAAAATGAGATTTTAAAGGGGGAAAAACAAGAAAACAAGATTAAACTAG
TAATATATTTATATTTATTGTATTGAGGTTTATTCGAACGCAAGATCGAAACCTGAAAATTGTACACTGTTTTTTTTTGCTGGCACCATTTGCA
TCTAGATGCATGGCTGCAGGAATATCATCATGATCTCCCGATCCAACCCGGGTTTCCAGCTCTCCGGTTGACGTGTTGGTGGCGGTGGTGGTGG
TGGTGGTCCCAGTGAAGGGTTGGCTGTACAAAGCTGTGAGTTGGTGAAAATAAGGACAAGTCCTTGAGTCAAGTGGTCTCTTCTTGTTAACATC
TTTTGTTTTCTTAAAATATTTGTTGATGTTTTCCCATTTCTCTTTGCATCTCTTGGCACTTCTCTTGTACCCACTCTCCAACATTTTCTTTGAT
ATTCTTTCCCACAAAGAAACAGCTTTTGGGGATGATGATGATAATGAGATCCCATCTTTGTGATGTTCATCATCATTCATGGTACTGATACTGC
GTCTGATGTTGATAAGAGCCAGCACCTCATCTCTAGGCCATCTCTTGCTAATATCACTCTTATCATCACTTTTTGGAGGTTTTATGTTTTGGGT
TTTGGTTTTTAGAGTTTTAGTTGAAATGGGATCAAGTGGTATGTCATTGGTTTGAAGAGAAATAGGGTATTCTGAGGTTAGGGTTCGAGGTAAT
AGTGCTGACGAAGTTTGACACTCTGTTATACCTTGGGT |
Primers for UN65600 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGCTGCAGGAATATCATCA |
60.182 |
20 |
TGCCAAGAGATGCAAAGAGA |
59.673 |
20 |
236 |
199 |
434 |
| 2 |
ATCATGATCTCCCGATCCAA |
60.244 |
20 |
TGCCAAGAGATGCAAAGAGA |
59.673 |
20 |
220 |
215 |
434 |
| 3 |
TGGCTGCAGGAATATCATCA |
60.182 |
20 |
CAGCTTTGTACAGCCAACCC |
60.689 |
20 |
120 |
199 |
318 |
|
|
