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Simple sequence repeat (SSR)
>UN05665
CAACATAAATTTTCGTACTATGAAAACTTGGAATCTGAAGAAGGGGAAATTTAAAAACTTCAACTACTCAATCCAAAGGTTTCACAATTAATGT
GATCTCAAGTAAAATTTGAAACAAAGGGGAAAGTATTAGATTCATAATCTGTTGTTCAAAAAAGGGAGGCAGAGAAACATCGTCCAATAAGTTA
AATCACTTGGTCTTCTCTGTTGTTTCACCATCTTCATTTGCAGCTGAAGATTCCTTTAGAATATGTGCACCAAGTCATAAGCAAATGTCCAGAA
CAGCACAAAAGACATAAGACCACCAAGAAAGCCGTCAAAAAGAACCCGATTCCACGAATCAAAGTATAAGTCTGCCGAGAATCCTGCCTTAGCC
ATGAGTCCAACAGATGTGATCAACATCACCGCAAAGTAAAACACAAAACCAGTCAACCCCGTGAATCCAATAATCCCCGCAAGGACTCCAGCGA
TGATGGACAGAAACGTCCGGCTGTTCTGTATGACTTTCAAATTCTTCTGTAGATTCTCTCCACTGAAGGTTGGAATATCACTCAGGACATCCTT
TGATCTCTTCTCAGATGAACCCATTACAAATAGTTAGAAACGAGATCAGGAAGAGCAGAGCAGCGAATCTGAGAGATTGAGAGAGAGAGAGAAA
GCGAGGAAGAAACAACAAGGCGAGCTATCTTCTAAAGCCCATTCCC |
Primers for UN05665 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACACAAAACCAGTCAACCCC |
59.721 |
20 |
GCTCGCCTTGTTGTTTCTTC |
60 |
20 |
267 |
417 |
683 |
2 |
AATAATCCCCGCAAGGACTC |
60.286 |
20 |
GCTCGCCTTGTTGTTTCTTC |
60 |
20 |
239 |
445 |
683 |
3 |
AACGTCCGGCTGTTCTGTAT |
59.621 |
20 |
GCTCGCCTTGTTGTTTCTTC |
60 |
20 |
202 |
482 |
683 |
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