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Simple sequence repeat (SSR)
>UN65899
AGGAGGATTCTCAGTGCCCATTTCGCTTGAAGATCGTTTAGCAGCTTTGAGTTTCTTGATTATAGATCCCGTGGAACCTCGAGGAGACTCAATC
AGGGGCTGGAGAGAGCTTCCAGCTTCTGGTCCAGACTCTTGCTTAAGAGGCGCCATAGCTTCAGATTTCACATGCTCTGGATTTACTACAGTTC
TTTCTTCCGTTTTCTCTGCTGATTCTTCGGCTACATCTTTTTCTTCATCAAGAGAGAGCTTTGGAAGAGTCCCAGGAATAGCTGTACTTGAAGA
GTTGGAATACATGCTCACAATCCCAGGCTGCTCATCTTTTATTGGACTTTGAAGCGTTGACACTCTTCTCGGTAGCATAGGAACGCCCGTGCTT
GAACTTGCTTCGACTTGGCCCAATGAAACATTCTTATCACCAGCTTCATCTCTGCGTTTGAGAAGATACTTGTCTTGTTTCTTCGAATCCTTAA
CCTTTGTGGGGGTTTTAGAGCTCTTCGGTACACCTAGAGTTTCTGCTATGACCAGCGGGCCACTCAAGGGAGCTCTGGAGGGTGTTCTATTATG
GGGTTCATTCGAAGTCACCGAAGCACGCACAGACTTGGACCCAAACGCCTGTGAATAGGTTTCATCGAACTCCTCAAACACTGCCTTGCGGAAA
GCAGAAACCACCGCTTTCTTCTTCAGAAAACCCAAACCCTCTCCATCATCATCATCATCACACTCCCGAGGCGCTAAAGCCAACCCTTTCACAA
ACGATAAAGCCTCAGCAGCGAAACTCATCCCTCGCCTCTATCTGCTCCCAGAGTAACCCTTGACCTCGTATCCGGGACATCACAGAGAAAAA |
Primers for UN65899 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCAAACGCCTGTGAATAGGT |
59.993 |
20 |
TTTCGCTGCTGAGGCTTTAT |
60.117 |
20 |
171 |
605 |
775 |
2 |
ACCCAAACGCCTGTGAATAG |
59.993 |
20 |
TTTCGCTGCTGAGGCTTTAT |
60.117 |
20 |
173 |
603 |
775 |
3 |
CCAAACGCCTGTGAATAGGT |
59.993 |
20 |
ATCGTTTGTGAAAGGGTTGG |
59.83 |
20 |
153 |
605 |
757 |
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