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Simple sequence repeat (SSR)
>UN65989
TTTTTTTTCTTCACCCTAGAATCTGAGGTGGAAGCTTTCTAAGTTCAAAGCTTTAGTTTTGTTAAGTGGGAGAGAGAGAGAGAGAGTTAAAGGA
AACGACTTTGTTGTTGAAGGGGTACAATTATAAAATACTTTATTTTTGCAGTAACAATTTAGCATCTTTATGCCACTTGGTGGAACAGCTTTGG
AAATTGGAACTTTCTCGTGTTGTGGCTATTGTTGTTATTTGCTCTGATTCAAAGATCTTCCTTTTTTTTTTTTTGGCTACTCTGATTTGAGAGT
CAACTTGAATATTTGCGTTCAGCGTTTACTTTCCTTAGTTTCTTCAACTCGTCAAGTACGCAACTGATCAACTTTGGATTCATTCACTTTGCTT
ATGCGTGTGTGCTTCTTCCTTTTTTGCAACTTGGTAGTCTGTATGGGTACCTAGGAGAAGAAGGAACTTGTTGTTGTGGCAGGCAAGGATCAGA
TGCATAGTATTAGCTCCAACCCCGCTGGTGACCTTGAGAAGCAGCAGCAGCAGGACAAGGCTCAAGAGAAGCAGAGCGAGTCAGTACATGAGTC
TGCCAAGGAAGTGAACCACCTCACCATTGTTGTCTGCAATGGAGATTCAAGTGGGGCACATGAAACCGTAGAATTGGCTCAGATCTATGGGCCA
GCAGCTGAGAGGGAGAGTCCCCCAAAAAGTTTGCTTGTCAGAAACTCCAGCTCTCACGAGCAGTGTATGGTTTGTC |
Primers for UN65989 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTAGAATCTGAGGTGGAAGC |
58.015 |
21 |
TGTTCCACCAAGTGGCATAA |
59.964 |
20 |
167 |
15 |
181 |
2 |
CCCTAGAATCTGAGGTGGAAG |
57.869 |
21 |
TGTTCCACCAAGTGGCATAA |
59.964 |
20 |
168 |
14 |
181 |
3 |
ACCCTAGAATCTGAGGTGGAAG |
58.737 |
22 |
TGTTCCACCAAGTGGCATAA |
59.964 |
20 |
169 |
13 |
181 |
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