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Simple sequence repeat (SSR)
>UN66193
GGGCTGTTATAGAAAAAGAAAAACGAGAAAACACCAACGACTCTCTTTTCTCTCTCTCTCCCTTCTCCCCATGGATTCCGACGCCGGACCACGT
CAGCCTCGATCCGGAGGCAAGATTGTTCGACCTCGCCGGAGAGCCGTTGTCAGGACGCCCTACGAACGCCCTGCTCCAAGATCCAGGGATCCTC
CTCCTCCTCCTCAGCAAAACCCTAGTTGGATCTCCAGGCTCGTTTACAAACCTGTCACCGTTATTGCCTCCGGCGCCGGGAAATTCATTTCTTC
AGTCGTCTTCTCTGAATCTTCCTCCTCTTCTTCTGACGACGAGGATTCATCCTCCTCAGATATTGAAGGTGATGAGGATGTTGAGAAGAACATT
TCTGATTTTCTCGAAGATGAAACAATGGTTGAGCAGTCAGCCATCCAAGGACTCAGTTCTAAGCATGTAATTGAGCAGCTTCTCATGCAAGAAA
CATTTGCAAGGGAAGAGGGCGATAGGTTAATAGATATCATCAAGGCGAGAGTTGTAGATCATCTCAGTGTCCCCGATGCTATGAGAGGAGGCAC
AGTGATAATGGATTGACAAATGAGGTGAATGTGGGTGAAATGTCCAACAAAGCTGTCATGGAAGCAAAAAGATGGTTGGAGGAGAAGAAATCAG
CATCAAAGTCTATAGCGACTGAAGATGGTGGTGGATCGCCTGTGGATGTGGCCAAGTCATATATGCGAGCTCGTCTGCCATGGGGTTCTCAGCT
GTGAACAGTTCAGAGTTTCAGTCGCCATCACCA |
Primers for UN66193 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAACGAGAAAACACCAACGA |
59.64 |
21 |
GGTTTGTAAACGAGCCTGGA |
60.11 |
20 |
221 |
20 |
240 |
2 |
AAAACGAGAAAACACCAACGA |
59.64 |
21 |
GGCAATAACGGTGACAGGTT |
59.859 |
20 |
237 |
20 |
256 |
3 |
AAAACGAGAAAACACCAACGA |
59.64 |
21 |
TAGGGTTTTGCTGAGGAGGA |
59.807 |
20 |
193 |
20 |
212 |
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