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Simple sequence repeat (SSR)
>UN66209
GGAGGAAAAAAATTTAATTAAAATCCCAAAAAATCAGAAAACTCATCACCTTCTTCTTCTCTCTCTCTCTCTAAATCCATGGATCCTTCTTTCT
CTGTCCCCAACGATCCTCACCATCCTCCTCCGTTCACCGCTTTCCCAAACCCCTTCCCCGTCACCCAACACCCCTTCTACAGCAACACCGTTAA
CTCCTCCCCCGTCGCGCCGCCTAACAACAACAACAACCAGTTCTTCCAACCGCAGCCGCATCCAACATGGGTTCACCCTCCTTACTCCGAAATG
ATTTGCACAGCGATAGCTGCGTTGAACGAAGCATAGGGGTCGAGCAAGCAAGCGATATCGAGGTACATAGAGAGAACGTACACAGGGATACCTC
CTGCTCATAAAGCTCTCCTGACTCACCATCTCAAGTCTCTCAAGAACAGTGGCGTTCTAATGATGGTCAAGAAGTCCTACAAACTAGCTCTTGA
ACCACCTCCTCCTCCCAGATCTGACAATTCAGTCAACGAGATGCAAGATCTCGCTCCGACATCTACTCAGAAGAAGCGCGGTCGTGGTCGGCCT
CCAAAGGCAAAACCTGATGATGCTGTTCAGACCAACGGAAAAGAGTTACCTGTTTCTCG |
Primers for UN66209 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCTTCTACAGCAACACCGT |
60.171 |
20 |
TGACCATCATTAGAACGCCA |
60.073 |
20 |
280 |
166 |
445 |
2 |
CCCTTCTACAGCAACACCGT |
60.171 |
20 |
GACCCCTATGCTTCGTTCAA |
60.074 |
20 |
158 |
166 |
323 |
3 |
TCACCCAACACCCCTTCTAC |
59.82 |
20 |
GACCCCTATGCTTCGTTCAA |
60.074 |
20 |
169 |
155 |
323 |
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