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Simple sequence repeat (SSR)
>UN66565
ATGGGAACTTTTGTTTTTTGTTTCTTTGGTTTTTAGTTGCATTGATAAAGATTAGAGTTTGCTTGTTCCCTAAGTTAACAGAAGATGATAAATA
CACTCACACAGACACTCTGAAGATCCGTCCTTTTTCCCTCTTCAGCCTCCCTACCCAACAAACTCAAATAAACCGATAACCTGTATAACCGGTT
ATCAGCTTTATAGTACACAACCATGAGGCCTGAGCGGTGGACTGAAACCGCCACCTAGTAAGAGTTTTGCCATAGGTGCTGCTGCGGTGTTTGC
TTTGAGGGCTGGCCTTGCGAGCCACCTTCCCTTGGGTTTCGCTGTTGTTGTTGTTGTTGGTTAAGAGAGAAGTTTCCGGCTCCAACATTGCTCG
AACTCCCGAATCCATATGGGGAGGAGATGGGGGCGGACTGAGGCAAACTACTGGGGGAAATGTTGTTTTTGTACTGAGGAAGCAAAGCGGCAGG
TGACTGGTGGTATGAGCTATTACCAGAAAATGCTTGCTGGAAAGCCGAGGGCATGTATGGGTAGCCCTGAGGCATCAAAGGGTAACTGATCATG
TTGGCAAAGTGAGTTAGAGGCACAGTATGCTGAGAATAAATTAGCAGATGATCTGGAATTAAGACAGCAGGTCTATCCTCCTCATGAGAGGAGT
ATTTATCATGGTTTTTCTATGCTCAATTCTTGAAGGTTAGCAGCAACAGCC |
Primers for UN66565 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAGATCCGTCCTTTTTCCC |
59.881 |
20 |
TATGGATTCGGGAGTTCGAG |
60.029 |
20 |
280 |
113 |
392 |
2 |
GAAGATCCGTCCTTTTTCCC |
59.881 |
20 |
GGAGCCGGAAACTTCTCTCT |
59.957 |
20 |
253 |
113 |
365 |
3 |
CCTTTTTCCCTCTTCAGCCT |
59.821 |
20 |
TATGGATTCGGGAGTTCGAG |
60.029 |
20 |
270 |
123 |
392 |
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