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Simple sequence repeat (SSR)
>UN66960
TTTTTGTCATCATGCTCCTATTGAATACAGATGCTAGGCAAACAGTGGATGAGACAGACAAGAAAACAAAAAACACTCTTTAAACTCGGGTGTT
AACGCTTCATGTGTGTTGTTGTTGTTGTCCTTGGACGTGCAAACCCCGGCTGGCACCAAAAAAAAAACGAAACAAACATATATTAGTGACGAAT
CACAGAATCTTGTTGAGCAAGGCATATCACTGTTTTATAGCAAAAGTTTTACCTGAAGCAGCATTGAAGGAGCTTCTTGATTAACAGGAGGACG
AACATGGCTTCTCGTTTTCCTTCTATCCAACGAAGGACTGTTTGCTGTGGTTATGTCCCAGAAGCTTCTCTTTTTAGCTGCTGCAGCTGGAGAT
GCAAACCGATGACTAGGGCTTTTTATCAGCTCCTTCTCTTTCTCCTTCGGTCTCAAGCTCCCTCTCGTCACAACCCTCCTTGTTGTTGTCTCTT
TGCCTCTTTCTGGAGTTTTCTCGCTCTTTTTACTACACAGTTCTTTCATTAGCTCTTCCTTTTGCTTCTTCGTCTGCACCACATGTTCCCTCTT
CAGTCTCTCCATCTCCATCTTCAACGCCTTGACAGTCAGCTGAAGCTCCTTCACTGCATCTTCCGCTTTTCTCCTTTTGGATGACTCTGGTGTG
AAACATGTTCCT |
Primers for UN66960 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCGGGTGTTAACGCTTCAT |
60.132 |
20 |
TGGGACATAACCACAGCAAA |
59.964 |
20 |
258 |
85 |
342 |
2 |
CTCGGGTGTTAACGCTTCAT |
60.132 |
20 |
TCTGGGACATAACCACAGCA |
60.112 |
20 |
260 |
85 |
344 |
3 |
CTCGGGTGTTAACGCTTCAT |
60.132 |
20 |
GAGAAGCCATGTTCGTCCTC |
59.81 |
20 |
211 |
85 |
295 |
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