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Simple sequence repeat (SSR)
>UN67217
CATAAATCGAATCAGTATTTATGATATAACCCAAGAATTAGACTTTGCTCATGACATGGTCTATTTCATGAACATGGGATCAGGACCTCAAGAA
GATAAATGTTCTCACAATAACTGCGTCAGTGCAAAGTTGAAAAGGTAAACAAAACTTGAAATAATCTGATAAAAAGTGGTTACAAAAATGATTG
TTCAATCCTCTTCATCGATGACTTTGGTGCCAAGACCGGAGAGACCTTCGGCGGGGATTTCAGCGACAGTGACAAGGGAGAAGAACTCTTCCTT
TGCATCTTCGTCATCGTTTCTCTTACGAGCAACTCGGACTCTGATCCTTCTAGGAGGACCTCTGATACCTCTGCTCCAAATCTGCTTGTTCAGT
TTCACATCGACTCTCACATCCTTTGTCCCCATTGCCTTCTCTGCAAACTTCCTTATCTCCTTGATTGCCTTTGGTGCCTTCTTCTTGAAGGTAA
AGCTATGAAGGCGTCGGTGAAGGTTAATGGTGTACTCTCTAGTCACCACCTCCTCTTTCCTTCCCTTCTTCTCCGACATTTCTAAATGTCTTTT
TCTCTGTTCCTTCGCTTCTCCAAGAACGCCGAGAGAGAGAGACGGTTGGGGACGGAGGGGTAGTTGGCTTATATGCGGCGATCAGCAGGTAGAA
TGACTCTTACCCTAGTCGATTTAATT |
Primers for UN67217 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTCGGTGAAGGTTAATGGT |
59.853 |
20 |
ATAAGCCAACTACCCCTCCG |
60.332 |
20 |
155 |
482 |
636 |
2 |
CCTTTGGTGCCTTCTTCTTG |
59.846 |
20 |
ATAAGCCAACTACCCCTCCG |
60.332 |
20 |
193 |
444 |
636 |
3 |
TCACATCCTTTGTCCCCATT |
60.173 |
20 |
ATAAGCCAACTACCCCTCCG |
60.332 |
20 |
247 |
390 |
636 |
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