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Simple sequence repeat (SSR)
>UN68506
GGGTGTCACGTTCATTATATTCACCACCGTTACCATTCATTCGCTCTCTCTCAGTTCTTTCATCACCACAACGCAGCAAAAGCACGACGACGAT
GGAGAAGGAGAAGAAGATGATCACGTTGAAGAGCTCCGACGATGAATCCTTTGAAGTCGATGAAGCGGTCGTACTTCAGTCTCCGTGCTTGACG
AATGTTGTTGAAGATTGCGACGATCCCGTATACAAGATTAAGGAAGTCACAGGGAAGATCCTCGCGAAGGTGATCGAATACTGCAAGAACCACG
TCGCCGTCGTCAACAGTGCCGATTCTTCCTCTTCCTCTTCCTCTTCCTCCTCTGGTGATGATGCTCTCAAGAAGTTGGACGCTGAGTTCATCAA
GGAGATGGATCTGTCCACGGTCTATGATCTCCTCATGGCTGCGAACTACCTAGACATCAAAGGTCTAATTGATCTCGCTTGCCAGAGAGTCGCT
GATGAGATCGCAGCATGCAAAGACCATAAGGAGATTCGCGCAAAGCTCGGCATCGTGAGTGACTACACAGCAGAGGAAGAAGCAGAGGTTCTCA
AGGAGAACGAGTGGGCTTTTGATTGAGTGGAGCGGGTTAAATACGAACCCTAACTAGTTTTTCTTTGTTTGGTGCGTGTGTGTGTGTGTGTTTT
CGAATCTTTAGATCGGATATTAGATGAACATTTGCTTTCTTGATTTGGTTTTGTGATGTGAACCTTTCTTGACGCTTAAGCAAGATGAGGATGA
TGATGATAAACTGCATGCATCTATCTAGAGAGTCTGTACATG |
Primers for UN68506 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCGGCATCGTGAGTGACTA |
60.008 |
20 |
AAGCGTCAAGAAAGGTTCACA |
59.906 |
21 |
220 |
516 |
735 |
2 |
GTGGAGCGGGTTAAATACGA |
59.96 |
20 |
AAGCGTCAAGAAAGGTTCACA |
59.906 |
21 |
145 |
591 |
735 |
3 |
AACGAGTGGGCTTTTGATTG |
60.11 |
20 |
AAGCGTCAAGAAAGGTTCACA |
59.906 |
21 |
166 |
570 |
735 |
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