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Simple sequence repeat (SSR)
>UN68894
TTTTTGTGAGGGACATTGTATTACAGAAAAAAAAAATCTCTTGAGTTTTGATTTTGTTCACTTACCTTTGAAGCTAATTTCTTTACAGGTGTTT
TTTGTCCAAACTCCATTGATACAACATTCTCTTTTGATAAGTTAAAAAGAAGAAGAAGAAGAGGAAGCAATGTATACCTCCGAGGGAGCCCCTG
ATTTTGTTGCTGAACAGGGCTTGTATTACCCCGTTGATCCCAATTATGCCTATTATTGTACAGGTTATGAGTCACCCGGCGAATGGGAGAACCA
TCAGATGTTTTTTGGTGTAGATGGTTCACAACTCCAGTACCAGGGTGGGCAGAATGAGAATTCTCCCTATATATACTATACGCCTAGTTATGGA
TTTGCACAGTCTCCTTACAATCCCTTCAATCCTTACATCCCTGGCGCTGATTCTCCTTTCCTCCCTGCTTCCCAACAATACTACCCTCTTCCTC
CTTACCAGAATGTCGCATCGTCTCCCCCTGCCTTTGTTCCCTATGCAGCTCACCCTGATATCGTCTCCAGTAGCTCGGCTAACCCTTCGGTGGA
GACTGGTTCAGCAGCTAACAGGGGTCGGTCTGACGGGAGAGGATCCAGGAACAGAAATGCTTCAGCAGCTGATGGGACGCAGAGGAATGCCCCT
GCAGCTAATTCTGTTAGCAGATCCTCCGAGAAGCCACGGCCTAACCCTGGAGGACAGAACAGACCAGTAGCACAGAGAAGAGAGTTTC |
Primers for UN68894 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTGTCCAAACTCCATTGATACA |
59.37 |
23 |
TTGGGATCAACGGGGTAATA |
60.009 |
20 |
137 |
95 |
231 |
| 2 |
TTTTTGTCCAAACTCCATTGAT |
58.467 |
22 |
GCCCTGTTCAGCAACAAAAT |
60.118 |
20 |
116 |
93 |
208 |
| 3 |
TTTTTGTCCAAACTCCATTGAT |
58.467 |
22 |
CCGGGTGACTCATAACCTGT |
59.844 |
20 |
175 |
93 |
267 |
|
|
