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Simple sequence repeat (SSR)
>UN69005
CGTTAGATAACTTTTCCGATGATAGATAAAATCTTAAGACATAAGTAAAAACCAAAAACTACTTATTTGTTCACACAAGCAACTTAGGCTCTGC
CCTTTCCTTTTCCCTTGCCCTTGTTGTTGGAACCAGACTGCTTGCCAGAATTGAATTGCTTCTTGTTACCAGCGGATGATTGACCTGGGCCCTG
GTTAAGACTCTTTCCACCCTTTTTAGCTGGGTGTGGTGTAGCTGTGTGCCCGCTCTTCTTCTTCTCTTCAGTGTTCTGAGGAGTGGGTGCTACT
GCAGTTTTGGTCTTCTTTGCTGGGACAGGTGTTTTGGAAGCAGATGCAGTGGCCCTCTTCTTGTTGCTCGGCTGCTCAGGCTGCTTAGGGGTCT
CCTCCTCTTCCTCTTCAACCTCCTCCTCCTCCTCAGAGTCATCTTCTTCATCCTTCTCCTCCTCAGACTCATCATCATCATCAGACTCTGACTC
AGGCTTCACTTCAGCAGGCTTGGCTTTTGGTTTTGAGCCAGCAGCCTTGGAAGCAGCAGCAGCATTCCCAACGGAAGTGACAGTTGAAGTAGCA
GGAACCACCTCCTCCTCCTCCTCTGAATCAGAAGGGTAGTCCTCCTCTTGATCGATGTTGGGAGATCTGTAGCCAACAAAGTGGACACTACCAC
TCTCCAAAGAGTGAGAAAGCTCAAACTCCTGCTCGAAGA |
Primers for UN69005 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTTTTGGAAGCAGATGCAG |
59.988 |
20 |
CTGTCACTTCCGTTGGGAAT |
59.966 |
20 |
242 |
312 |
553 |
2 |
TTTTGGAAGCAGATGCAGTG |
59.988 |
20 |
CTGTCACTTCCGTTGGGAAT |
59.966 |
20 |
240 |
314 |
553 |
3 |
TGTTTTGGAAGCAGATGCAG |
59.988 |
20 |
GCTCAAAACCAAAAGCCAAG |
59.861 |
20 |
197 |
312 |
508 |
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