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Simple sequence repeat (SSR)
>UN69005
CGTTAGATAACTTTTCCGATGATAGATAAAATCTTAAGACATAAGTAAAAACCAAAAACTACTTATTTGTTCACACAAGCAACTTAGGCTCTGC
CCTTTCCTTTTCCCTTGCCCTTGTTGTTGGAACCAGACTGCTTGCCAGAATTGAATTGCTTCTTGTTACCAGCGGATGATTGACCTGGGCCCTG
GTTAAGACTCTTTCCACCCTTTTTAGCTGGGTGTGGTGTAGCTGTGTGCCCGCTCTTCTTCTTCTCTTCAGTGTTCTGAGGAGTGGGTGCTACT
GCAGTTTTGGTCTTCTTTGCTGGGACAGGTGTTTTGGAAGCAGATGCAGTGGCCCTCTTCTTGTTGCTCGGCTGCTCAGGCTGCTTAGGGGTCT
CCTCCTCTTCCTCTTCAACCTCCTCCTCCTCCTCAGAGTCATCTTCTTCATCCTTCTCCTCCTCAGACTCATCATCATCATCAGACTCTGACTC
AGGCTTCACTTCAGCAGGCTTGGCTTTTGGTTTTGAGCCAGCAGCCTTGGAAGCAGCAGCAGCATTCCCAACGGAAGTGACAGTTGAAGTAGCA
GGAACCACCTCCTCCTCCTCCTCTGAATCAGAAGGGTAGTCCTCCTCTTGATCGATGTTGGGAGATCTGTAGCCAACAAAGTGGACACTACCAC
TCTCCAAAGAGTGAGAAAGCTCAAACTCCTGCTCGAAGA |
Primers for UN69005 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTCCCAACGGAAGTGACAG |
59.966 |
20 |
CGAGCAGGAGTTTGAGCTTT |
59.757 |
20 |
160 |
534 |
693 |
2 |
ATTCCCAACGGAAGTGACAG |
59.966 |
20 |
TCGAGCAGGAGTTTGAGCTT |
60.277 |
20 |
161 |
534 |
694 |
3 |
ATTCCCAACGGAAGTGACAG |
59.966 |
20 |
CTTCGAGCAGGAGTTTGAGC |
60.277 |
20 |
163 |
534 |
696 |
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