 |
Simple sequence repeat (SSR)
>UN05992
AACTAAAATATACATACGAATGAATATACGATGACTTCAAATCTCCTTCGTAGTTAAACAAAACAAATCCCAACAAAATAAATTTAGAAAAAAA
GAATCAAAAGCAAAACTATAAAGAAAAGAAAAAGTAGCAAATTTTCTAGTTTCTCCAATATAGAGCCGAAGACTACTACTACATAGTTAATAAC
TTCCTAACAAGCACGACATGTTTTTTCTCTAACAGATGGATGGATCATCAATGGTGGTGAAACCTTTCGCTGGAGAATTGAAGATTCTCGATTC
CTTTGACCGCAGAGTCGTAATGTTTTCTGGTGGAACCAGACCTCTTCCCTTCCGGCGTTGTAACCACCGGTGTGTTTCTTAATCCGCCGCCCGC
ACGGGATTTCTGTAGCTCCTCCGATGTTAATCTTCTTGATGATCCTGCTGATTGCGCGAACACCGACGAGCTATGCATCATAGGGGCTGCTCTA
ATAGATGTTGACAAGTTGCCAGAGTTGTCAAACGTTCTCCTTCTTGATGAATCCATCGGTGGCCTTCCTCCATCTTCCTCCCCTGCGTAGGTCA
ATCCTGGGGGCAAAGCCGCACTGGTTCCAGCTGCAGGACTTACCAGACCACGGGATGGAGGAGCTGTTAGTTGTGATTGTTGATACTTTAATAT
GGTCCAGTCAAAGACATAATCGAACTGAAACCCTTCGCGGATAAAGAGATCTCTGAATATTCTTTTGAGATAACCGTAATCTGGTTTATCATCG
AACCGAAGCGAGCGGCAGTAATGGAAGTAAGATGCGAACTCTGATGGGTAACCACGGCATAAAGACTCAATGGATGTAGAGACTTTCTTTTCGC
TGATTCTCTCGTACTTCTGTTTCTTGGTTCCAGCTTTGAGTCCTTGCCATGGAAGACTTCCTTTAAGGAAATACATGAGAATGTAACCAAGAGA
TTCTAGGTCATCCCTTCGGCTTTGTTCAATTCCCAGGTGAGTATTCATACTAGCATATCTTGCAGTTCCAGTTAGATTCTTATTTTCTCTGTAA
GGAATGTGCTGATGAGTAGTGTTATCCCTGTACTTCTTAGCAAGTCCAAAGTCGATAATGTATACCTGGTTTGCACGTCTTCCTAAACCCATGA
GAAAATTGTCGGGCTTGAGATCACGGTGAAGGAAAGATTTGGAATGGAAATACTCAACACGGTTTATCATTTGATCAGCAAGCATGAGGACGGA
CTTGAGAGAAAGTTTTCTGCTACAGAAATTGAACAAGTCTTCAAGACTAGGACCAAGTAAATCCATGACCAGAACATTGTACTCTCCTTCAACA
CCAAACCACTTGATATTTGGCACACCAGTTCCTCCCTGTAGAAGTTTGTATAACTTGGATTCATAGAGCAGCTGTGGATGTTTTGTCTTTGCAT
TTTCAAGCTTGATGGCGACTTCTTCATTGGTTTGAATATGAGTACCGAGATGGATCTCTCCAAAAGAACCGCTTCCAATTTTCCGTCCGAGCCG
AAACTTGTTTCCCACAAGACGCTCCATCCCTAACTAACTAAGGATGATAATCTTCTCAACCAACGATTCAGACTCCAAAGGTGAAAACTTTACC
CTAACACACCAGAATCAGAGCAAATATCTCAATATTTCTGGGAAACTAGGGATGAGAACAGAGAAACCCATTAGTCATCGCGATCTGGGAACAA
AAGGAATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCGCCTTTGTCGGAACAGTCGTTATGGAGTTACCTG
TTGTAGATCTGTCTCGTTACCTACAATCATCCTCCAACGGCGAATCGAATCCTCATCTGGGAACCGATCTCGTCGACTCGTGCCGAGAGGTGAG
TCGGATCCTGAAGGAAACCGGAGCTCTACTTGTCAAAGATCCGAGATGCAGCGCCCAAGACAACGACCGGTTCATCGATATGATGGAGACGTAC
TTCTCCAAGCCCGATGAGTTCAAGCGGTTGCAACAGAGACCTAATCTCCACTATCAGGTTGGTGTGACACCGGAAGGAGTTGAGGTTCCGAGAA
GCCTTGTTGATGAAGAGATGCAAGAGAAATTCAAGACGATGCCTGAAGAGTATAAACCACACGTTCCCAAGGGACCAGATCACAAGTGGAGGTA
CATGTGGAGAGTAGGTCCTCGCCCATCTAACACACGCTTTAAGGAGCTTAACTCTGAGCCTGTGATACCAGAAGGTTTTCCAGAGTGGA |
Primers for UN05992 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGATCTGGGAACAAAAGGAA |
60.044 |
20 |
GATGAACCGGTCGTTGTCTT |
59.973 |
20 |
278 |
1679 |
1956 |
| 2 |
ATTAGTCATCGCGATCTGGG |
60.059 |
20 |
TAGAGCTCCGGTTTCCTTCA |
59.948 |
20 |
241 |
1668 |
1908 |
| 3 |
ATTAGTCATCGCGATCTGGG |
60.059 |
20 |
AACGACTGTTCCGACAAAGG |
60.149 |
20 |
106 |
1668 |
1773 |
|
|
