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Simple sequence repeat (SSR)
>UN05998
AAACGAAACAGAATACAATAAATTGTAGTAACGTTATTATTTCAGAAGACTCTCAACAACACACTGTAAGAGAGGAGAAGAAGAAGCTTTTAAA
ACCGCTCACAAAAGATGGAAAAAAACCTATAAGATTCTTCAACAATAGAAGCAAATACAAACTAAAATCAAAGAAAGAAAGAAAGAAAGAAAGA
AAGAAAGAAAAAGAGACACAATTCAGCATCCCCACCCGTAGTGATTCATACACTAAACCTCACCGTCTGATTCAGCAGCATCTTCATCATCGTC
AGATTCAGGCCAAACATACTCGACGTCAAGAGGATGTCTATGCAGGAAATTCAAGAGCTGTTCAAGGTTTCTCATTGGCCTAAACGGACCTTGC
CCCTCTGCCTCTTCTTCGTTCTCATCCATTTCTTGTGGATCACTGTAACTCAACACCTTCAACCCAAACTTCCCTGACTCATCCGGATCTACCA
CCTGAAACGATTTTGCTAGTGATCTTCCCATCACTTTCACATGCGACACGCATATGTAGTATAAGCCATCCATTTCTTGTGTCTGAACCCGACC
TAGAAACTCCACTAGCATATACCCACCAATGCAAAGAACCGGTTCTGGAAGCTTAAAGTTCTGCAACCGATTCTCCTGAGCCATAGGAAACTCT
TGTGAAGTGTAAGTCCATACATATTTGTTTTCAACAGGAATCTTTCCTCCTGACTCAGCTTGATTGTTATCGTCGAGGTGACCCAACCGGAAAC
GAACATAATGTGAAGAGTATATCGGAGTACCAGGCTGGAAATAAGCTTGGAAAGGCTGGACGCTGAGTTCAGTAATGAGACACAAATCACCTTT
CAGCTGGTAAAGAAGTGTTTCGGGCACGGAAGTCCTGTGGTGTCCTGTACTAGACCAATACGAAGGGGTGCCACCAATTCTATCTCTTTCGTCG
AGTGTGTTCAAGATGCTCTCTGCTGGGAAATTATCAGTACTGGAGGCTACAATGGCATCAGCAATACAGCTTCTGATAGGGGAAGATGTGCATC
CTTTAGTCAATAAGGCATAAACCCTGTGCTCTCTTTCTAGTACCCTTGTATCATCATCATCATCCATGAGACTGCTGCTTGACCCGGTGGCTTC
AAAGGATTCCTTCATATCATTGCTTGTGTCTATTATACGATCCACACTAGTTAGCTGATGGAACAACTTCAAGCACAGGTTCTTCGAGAGACTG
TATTTAATCACAAAGGCACGCCAGGAGCGTGAGACAGCACTGGCACGGACAAGATCTGATGGGTCATCAAGACACGAAAGAATGGCTAGAGACA
TGTCGGTATCAAGATTCTTAACGAAATCCATTCTATTGTTCGATCAAATTCCCTGTATTTCTAAATCGATAATCGGATAAGAGCGACGGTGACC
TTAGCGATTGAAATGGGATTAGTTCGAAGACAAACGATTCCTGACTGTCTCTCGAATCATTCGGGTCTCTATCAAAACCAATAGGCCGACATCG
TCAACGGCCC |
Primers for UN05998 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGCATAAACCCTGTGCTCTC |
59.7 |
20 |
TTTCGTGTCTTGATGACCCA |
60.088 |
20 |
254 |
1048 |
1301 |
2 |
AGATGCTCTCTGCTGGGAAA |
60.096 |
20 |
AGGAATCCTTTGAAGCCACC |
60.443 |
20 |
189 |
951 |
1139 |
3 |
AAGATGCTCTCTGCTGGGAA |
60.096 |
20 |
AGGAATCCTTTGAAGCCACC |
60.443 |
20 |
190 |
950 |
1139 |
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