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Simple sequence repeat (SSR)
>UN70449
GCAAAAAGATTCAATAGAATCTTCGAATTAGATTAAAATGGGTTTCTTAACATTGATGTGATAATAAATGGGAGCAGCTGAAGTAAGAGCACTC
TGGCAAAGAAGAGCAAGCCGTTGCTTTATTGTTCATGAAGATGCTACTATACCTCCTCCAAGGTTAGCTTGTTGCCACCATCAACAACAACAAC
AACAACAACAACATTCTTCTTCTTCTTCAGGCAAGAACAGCTTTTCTTCTGCAAGTTTTGGAGATTCCTTTGATTTCTCTTCTGATACCAAATG
GTGGCTTAAAGGATCATCTTGTTTTGATGAGGAGATTGCAAACTCTTTCCTCCAAGATACCAAATTCCACGAATTCGTCGACTTGACCGGGATA
AGTAAAGAAAAAGAAGAAGAAGAAGACTATAGCTTTGTTAGCAAGAAAGATACAGCTACAACTCCATGGTGGAGAAGCACTACTGATCAAGATG
AACTAGCCCTCTTGCTGTCCACTAGATCAGTTGATCATCATATTCAAAACTGTGATCTTCCTCCGCCCCAGAAGCTCCACAAGAGCATTCACTG
CACTACTACTAGTAGTGAAAAAGGGTTTCAGACAGCAGTTATTAAATCACCATGGAACAAAGTGCTTGGAGCGATCGGTTTGATAGATCTTTGA
GTCACAGCAGCATATAGCATAGAGAGCAGACATGAGTCCGAGTCTCTCTAGAGCGATGATCTAGCAAGCTCAGCTTTAGAGCACTGAGACATCT
CAACAGAGCAGAGAGCAGAGCAGCGGC |
Primers for UN70449 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCAAGGTTAGCTTGTTGCC |
60.249 |
20 |
TCGTGGAATTTGGTATCTTGG |
59.809 |
21 |
204 |
151 |
354 |
| 2 |
GCAAGCCGTTGCTTTATTGT |
60.272 |
20 |
TCGTGGAATTTGGTATCTTGG |
59.809 |
21 |
248 |
107 |
354 |
| 3 |
GCAAGCCGTTGCTTTATTGT |
60.272 |
20 |
CGTGGAATTTGGTATCTTGGA |
59.809 |
21 |
247 |
107 |
353 |
|
|
