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Simple sequence repeat (SSR)
>UN71011
CAATTGGGAATTGCGATTCTCTATTTACCGTTTTGTCCGCTCTCTCTCTCTCTCTCTCTCTGAACTTCAGAGTCTGAACCCTAGATTTCCTCTG
GAGCTAAGATTGAGAAACTCAAAGCTTGTTTGTTTCTTATGAGTGATTCAACGATGATCATAGACGAGACGAATCGAAAGAATCTCATCTTCCT
CATCTTACAGTTCCTTCACGAAGAGGGCTATTTGAAAAGCTTACACTTACTGGAGCAGGATTCAGGGGTTTTCTTTGATTATAGCTACTTTTCT
GGTTTTATTACCAATGGTAACTGGAGAGACGCAGAGGACTACCTTTCAGCATTCACTAGTCCAGATGCTAATACTTTCTCAAGGAAGATGTTCG
TTGACTTGTACAAGTGGAAGTTTTCTGAAGCAGCTCATAGTGGTGGCTCTGAATCTGTGAACATTTTCTCCAAGGATTTGAGACGGATTCCTGT
TTTCAAAGATGATGGCTTTGAGGATTTGGTTAACGTGATTGCCGTAGAAGATATAAGAATTCCTGAGAAAACTGGGAGCGTGGATAAAGCATTG
GTTAGAGCTAGTTTGTGTGTTGAACTCCGCAAACTAGCAGAAAGCAACCCTTCTTTATGTG |
Primers for UN71011 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGGAATTGCGATTCTCTATTTA |
59.947 |
23 |
CCCTCTTCGTGAAGGAACTG |
59.837 |
20 |
211 |
5 |
215 |
| 2 |
TGGGAATTGCGATTCTCTATTTA |
59.947 |
23 |
CCCTGAATCCTGCTCCAGTA |
60.21 |
20 |
251 |
5 |
255 |
| 3 |
TGGGAATTGCGATTCTCTATTTA |
59.947 |
23 |
AAAACCCCTGAATCCTGCTC |
60.443 |
20 |
256 |
5 |
260 |
|
|
