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Simple sequence repeat (SSR)
>UN71042
CGAAGCAAATCATTCTCCATTGAGACACACAAACTTTAACTACCAATTCATTGTCTGAATAGTACATTGTGATGTTATCAACATGAACAAAAAG
AATCGTTACAACGATAAGAGATTCTAAATCAACAAAGAATCTGTTCTGTTCGAACTGATCATCCATCAAGACAGAAACTTTAGTTCCAATTCAT
TGTCCCAATCTCCCCTGATCTCTGGTGATTTAAGCAAACTCCTCGTCTTCATCATCTTCCTCTTCCTCATACTCAGAATCAGACTCCTCCTCCT
CCTCTCTTTCGGGTTGCATCAACGTACTCATGTCAAAAGAAGCTGGACCGGACTCAACTTCCTCTATATCTATAGTATCATAACTCATCCTCTG
TTCGAACTTCTCCTCTGAACAGTTCAGCATCCAAGCCAACGAACATTTAATCCCCTTCTTGAACACCCTCTTGTGCCTCGGCTTCACCGTCGAC
TCCAACCCGTAAGTAAAGAACGCAGGGAAGTCCACGAGATCCTGAAGAGGTCTTCTCATCTCCTTTAGGAAGAACTCAAAGCTAAGCTTCATGA
TCCCAATGTTCAAAGCCAGAACCTGAGGACACCCAATCACCATCTCCCTCGTCTGATCTACCGAGAAGCCACACTCTTTAAGGAACGCAATGTG
CTCCAGCATAGGCGACTCGCTCAAGCTAACAAACTGTGGCATCCTCTCAACCAAAGAGCCGAGATCC |
Primers for UN71042 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTCCCAATCTCCCCTGATCT |
60.278 |
20 |
GGGTGTTCAAGAAGGGGATT |
60.169 |
20 |
255 |
190 |
444 |
| 2 |
GTCCCAATCTCCCCTGATCT |
60.278 |
20 |
AGGGTGTTCAAGAAGGGGAT |
59.795 |
20 |
256 |
190 |
445 |
| 3 |
GTCCCAATCTCCCCTGATCT |
60.278 |
20 |
AGTCCGGTCCAGCTTCTTTT |
60.247 |
20 |
147 |
190 |
336 |
|
|
