Simple sequence repeat (SSR)
>UN71122
GGCAAGGATTTATTTGCCATTAACTGTACATGGCCTTTCAAAGTTTACAGATTTTAAAGTTTAAAAGAGGAAAAAACTTTCAATTTAAACTCAC
CAAATATGTATAATGTATCTTTGGGAGGGAGAGAGAGAGAGAGAGGCAGAATAAGTCAATAAAAAGTAACTGTCAATTTGAATGACTTTTAAGT
CACAAACATATATAGAGAGAGAGCCATATACCATCACTAGTAGTTAAAAGAAAAATAACCCAAGAACGTCGTCCTTTGTTGGTGGTGGTCCAAG
GCTGCTCTCAGCTGTTTCACTTTGTTGGTGGTCCAAGGCTCTCATAGAACAAGATGTAGCCATGATCAGTATTGCTCGAGTACTCCTGAGACGA
TCCAAAGAACGTTTGCACAGCTGATTCTTCAATCATCTCCACGTTCTCATCATCAAAGAAGAGCCAGTGGTTATGGCTCTTCACCAGGCTCACG
TAGTGACCATGGTTCGGTCCACTTCCCACATGAACCACCACCGCAAAGAGCGAGTACTCCACGTCTGTGTACGGCTCCACCGTATTGC |
Primers for UN71122 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGCAAGGATTTATTTGCCAT |
58.901 |
20 |
GACCACCACCAACAAAGGAC |
60.261 |
20 |
278 |
1 |
278 |
| 2 |
GGCAAGGATTTATTTGCCATT |
60.162 |
21 |
GACCACCACCAACAAAGGAC |
60.261 |
20 |
278 |
1 |
278 |
| 3 |
GGCAAGGATTTATTTGCCAT |
58.901 |
20 |
AGGACGACGTTCTTGGGTTA |
59.592 |
20 |
263 |
1 |
263 |
|
|
