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Simple sequence repeat (SSR)
>UN71193
GGGAAAATTTTATAATTTTCTCAGTCGGCACTGAGAGAGAGAGCTCAGAGAGAGAGAGAGAGAAAAAAAAAGATGGGAAGCGGTGTAGCTCTCT
TTACTCTCTCCCTCCTCCTCGCGACTCATCACACTCACTCCGCAATCGGCGTGAACTGGGGAACGGTGTCGTTCCACAAGATGAAACCTTCCAC
AGTGGTGGATCTCCTCAAAGCAAACAAAATAACCAAAGTAAAGCTCTTCGACACAAACCCAGATGCACTCCGAGCTCTAATGGGCTCTGGAATC
CAAATCATGATCAGCATTCCCAACGACCTCCTCTCCACTTTCAACCCCGATCTCTTCGTCCAGCAGAACCTCTCTCGCTTCATGGGCAAAGGCG
GCGCTGACATCAGGTACGTTGCAGTGGGGAACGAGCCGTTCCTGACGAGTTACGGCGGTGTGTATCAGAACTATGTCGTCCCAGCTATGGTTAA
CCTCCAGCAGTCTTTGGTTAAAGCGAATCTAGCTAGCTATGTGAAGCTGGTTGTTCCTTGTAATGCAGATGCGTATGAGTCTAACGTTCCTTCC
CAAGGGACGTTTAGGCCTGAGCTGACGCAGATCATGACTCAGCTGGTTTCGTTTCTCAGCTCAAACGGCTCTCCTTTTGTTGTCAATATCTACC
CTTTCCTTAGTCTCTATCAGAACTCTGATTTTCCACAAGACTTTGCGTTTTTGAAGGAGTAGCCATCCTGTTCTCGATGGTCCTACGTTATTAC
ATGCCTTTGATGGAACTCGACACTCTTGTCTCG |
Primers for UN71193 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCAGTCGGCACTGAGAGAGA |
59.846 |
20 |
TGGATTCCAGAGCCCATTAG |
60.029 |
20 |
264 |
21 |
284 |
2 |
TCAGTCGGCACTGAGAGAGA |
59.846 |
20 |
TTGCTTTGAGGAGATCCACC |
60.195 |
20 |
191 |
21 |
211 |
3 |
TCAGTCGGCACTGAGAGAGA |
59.846 |
20 |
ATTGCGGAGTGAGTGTGATG |
59.707 |
20 |
120 |
21 |
140 |
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