Simple sequence repeat (SSR)
>UN00575
GGGCCTCCCTTCACGACCAAATCTCTCTCTCTCTCTCTCTCTCTCACTTTCCGCCACTACCACAACTCTCTAAAAGCCACTTCTTCGGTCTCGG
AGAGGGGAGACAGAGAGAGAGAAAGACTTATAGAAGTTTCTGTCTGTCCTACTCGGAGTCTCCGTTTTCTTTCCTTCCCCGGAGATACCAGATC
AGATCTGTTCAAGATGCAGAACGGCTCAGATTCAACGCCTCCGGCTAACCAAACTCCTCCTCCTCCTCTTCCGCCGCCTCAGCAGTGGCAACAT
CATCAACAGTGGAAAGAGACGGTTTGTGGATTACTTGAACAGAGAGTTTGGAGGTAATAACGCTTGAGATTGGTGGGTGAAGAAACATTTTACT
ATTTGTTTTTTTTTCATCTTCTCAACAGAAGCCGAGTTTACACTTTGTGCTCTTCAGTGAAAAGTTGTGGACTAATTTGATGTATTTGTCTTAT
TCAAACAAACATATAGTTTATCATTTATCAAGTTAAACAGTATTTTTGTGTGTAATGATATCTTTCCAGTTTCTTG |
Primers for UN00575 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCGGAGATACCAGATCAGA |
60.027 |
20 |
CCACTGTTGATGATGTTGCC |
59.967 |
20 |
123 |
172 |
294 |
| 2 |
CTCCGTTTTCTTTCCTTCCC |
60.046 |
20 |
CCACTGTTGATGATGTTGCC |
59.967 |
20 |
141 |
154 |
294 |
| 3 |
AGATGCAGAACGGCTCAGAT |
59.981 |
20 |
TCCACAAACCGTCTCTTTCC |
60.088 |
20 |
113 |
200 |
312 |
|
|
