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Simple sequence repeat (SSR)
>UN71561
GGAACGTGTAAACTACCTCTGGTTAGAAAATAGCAAAATATCTTCCTCAGCTTCTTCTCTCAAGCATCCCGAAGAAACCATGGCGTCCAGCTCC
TTCGCCATCCTTCCTTTGCTTAACTATAACTCCACCACCAATAGATCTTCTTCTTCGATTCGCTTCTTGAACCTCCCTAAATCGAAACACAGGT
CTTCGAAACACTCAAATCCTCGTTCTCCACAGGTTCTTGTCTCCTTCTCACTGAGCCAACCGGCTGATGAAGAATCCTCCGACGCCACTCTTTC
TAGAATCCAACTCAATCGCTGATTACATGCGGTTCAAGCGCCGCTCCGACGACGACGGCAACAACAACAACAACGGCTCTAGCGAGTTGCAGAC
TGCGATCGTCAGTTACAAGAAACGTTTCCCTTGGATTCTCCTCAACCCTTTTCTTCAGGTAGATTTGGTGTCAACGATTCATATTGCTGATAAA
GAGTATTTCACAGCTCTTCAAAAGGAGCTTGAACCCTATGATTCTATCTTGTATGAGATGGTGACTAGTAAAGAGTCCTTGGAAAACAGAAGAA
ACCCGATTGCTGCCAAGAGGCTCAAGACTTCACGACGTTCTAGAGGCTTCAGTATCCTCGGCTTCATCCAGCGGCAGATGGCTAGGGTGCTAAC
TCTTG |
Primers for UN71561 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGATTACATGCGGTTCAAGC |
59.694 |
20 |
CGGGTTTCTTCTGTTTTCCA |
60.081 |
20 |
268 |
302 |
569 |
2 |
GCTGATTACATGCGGTTCAA |
59.694 |
20 |
CGGGTTTCTTCTGTTTTCCA |
60.081 |
20 |
270 |
300 |
569 |
3 |
CGATTCGCTTCTTGAACCTC |
59.955 |
20 |
TGAGGAGAATCCAAGGGAAA |
59.6 |
20 |
271 |
150 |
420 |
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