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Simple sequence repeat (SSR)
>UN71614
GGATCCTTCATCGCTCAAGATATGCTTCACTTGTTAACATTCCTACAAACTGTAGCCAAGAAGACCATTCATTCCTTTTGTGCTATGATGATCA
TGTGAGATGAATGAGATATCTCTTACTAGCTTATTCTTTGTTCTGTAATAAGATTTAGAAAGAAAAGATGGGTAGATCACCGTGCTGTGACAAG
ATGGGTTTGAAGAAAGGACCATGGACATCAGAAGAAGAAGAAGAAGAACAAACCATTATTCAACTCCACGCTCTCTTAGGAAACAGGTGGTCGG
CGATAGCGACTCATTTGCCAAAGAGAACAGACAACGAGATAAAGAACTACTGGAACACGCACTTGAAGAAACGGTTAGTTAAAATGGGGATAGA
TCCAGTGACTCATAAACCCAAAAACGAGACTCCTCTGTCTTCTTCTCTTGGTGGTTTATCAAAGAACGCAGCCACACTTAGCCACATGGCTCAA
TGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTAGCTAGAGAGTCAAAGCTTCTTCTTTACCAAACCAAAGTATCATCATCATCATCATCTT
CTCATCATCAGCAGCAGCAGCTTGAATCTCCGACATCTACAGTGTCGTTCTCGGAAGCGAAGACAGAGTTCGTCGGATCATCATCATCAGCATC
AACGTGTCTAAATATGATCAAAGAAGCTGAAAACGATTGGATCAGTTCACGATTCACGAGTTCCAAGAGTCGA |
Primers for UN71614 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGATGGGTAGATCACCGTGC |
59.957 |
20 |
TCTTCAAGTGCGTGTTCCAG |
60.025 |
20 |
192 |
160 |
351 |
2 |
AGATGGGTAGATCACCGTGC |
59.957 |
20 |
AACCGTTTCTTCAAGTGCGT |
59.78 |
20 |
199 |
160 |
358 |
3 |
TCACCGTGCTGTGACAAGAT |
60.319 |
20 |
TCTTCAAGTGCGTGTTCCAG |
60.025 |
20 |
181 |
171 |
351 |
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