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Simple sequence repeat (SSR)
>UN71614
GGATCCTTCATCGCTCAAGATATGCTTCACTTGTTAACATTCCTACAAACTGTAGCCAAGAAGACCATTCATTCCTTTTGTGCTATGATGATCA
TGTGAGATGAATGAGATATCTCTTACTAGCTTATTCTTTGTTCTGTAATAAGATTTAGAAAGAAAAGATGGGTAGATCACCGTGCTGTGACAAG
ATGGGTTTGAAGAAAGGACCATGGACATCAGAAGAAGAAGAAGAAGAACAAACCATTATTCAACTCCACGCTCTCTTAGGAAACAGGTGGTCGG
CGATAGCGACTCATTTGCCAAAGAGAACAGACAACGAGATAAAGAACTACTGGAACACGCACTTGAAGAAACGGTTAGTTAAAATGGGGATAGA
TCCAGTGACTCATAAACCCAAAAACGAGACTCCTCTGTCTTCTTCTCTTGGTGGTTTATCAAAGAACGCAGCCACACTTAGCCACATGGCTCAA
TGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTAGCTAGAGAGTCAAAGCTTCTTCTTTACCAAACCAAAGTATCATCATCATCATCATCTT
CTCATCATCAGCAGCAGCAGCTTGAATCTCCGACATCTACAGTGTCGTTCTCGGAAGCGAAGACAGAGTTCGTCGGATCATCATCATCAGCATC
AACGTGTCTAAATATGATCAAAGAAGCTGAAAACGATTGGATCAGTTCACGATTCACGAGTTCCAAGAGTCGA |
Primers for UN71614 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTGAAGCTGAAGCAAGGCT |
59.898 |
20 |
CTGATGATGATGATCCGACG |
60.031 |
20 |
169 |
486 |
654 |
| 2 |
AGGCTTGAAGCTGAAGCAAG |
59.898 |
20 |
CTGATGATGATGATCCGACG |
60.031 |
20 |
172 |
483 |
654 |
| 3 |
CTTGAAGCTGAAGCAAGGCT |
59.898 |
20 |
CTGTCTTCGCTTCCGAGAAC |
60.134 |
20 |
145 |
486 |
630 |
|
|
