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Simple sequence repeat (SSR)
>UN06120
GGGAAAAAAGGTAAATGAGGCTTTGTTCTCCATCTTCAAAGCTTCATTTTACGATCTGAGATCAGGAATTGATTAGGGTTTCTTAACCCAATTT
TCGATTTTTCCCAATTTGATTAGGGTTCTTTTGTTGTTGTTGTTGTTATTGTTCTGTCTGTGTGTAGTAGTAGTTTGAATCAAATATGGCTGGG
AGAGCTTCGATCCCTGCTCGCAACTCTGCCCTCATCGCTATGATCGCTGACGAGGACACTGTTGTTGGATTCTTGATGGCTGGAGTTGGTAATG
TTGACATAAGGAGGAAAACTAATTACCTTATTGTGGATTCAAAGACAACGGTGAGACAAATTGAGGATGCTTTCAAGGAGTTCTCATCAAGAGA
TGATATTGCTATCATCCTCATCAGCCAATATGTTGCGAATATGATCAGGTTCTTGGTGGATAGCTACAACAAGCCAGTTCCTGCAATCCTGGAG
ATCCCTTCCAAGGACCATCCTTATGATCCTGCTCATGACTCTGTTCTCTCCCGTGTCAAGTACCTCTTCTCTGCTGAATCTGTGTCACAGCGTT
AAAACATATACACATCCTGCAAAGCTTGCTGAGCTTTTTATATCATTTGTTTGTTTTTGACATTCTTGTATTTGAGTCTCGAATTTCAATAATG
TTCTCTCTTGATTTTTATTTAAAGATGGATGTTTATGTTATTAAGAAGCAACGGTAAAACACCATCTGGTTCTTTTTGCATTAAATAAAGAGAG
TGAGTCTGTTGTGAAAAAAAAA |
Primers for UN06120 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCAATTTTCGATTTTTCCCA |
59.745 |
20 |
GCTCTCCCAGCCATATTTGA |
60.177 |
20 |
106 |
88 |
193 |
2 |
CCAATTTTCGATTTTTCCCA |
59.745 |
20 |
CAGCCATCAAGAATCCAACA |
59.648 |
20 |
183 |
88 |
270 |
3 |
CCAATTTTCGATTTTTCCCA |
59.745 |
20 |
TGTCCTCGTCAGCGATCATA |
60.376 |
20 |
159 |
88 |
246 |
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