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Simple sequence repeat (SSR)
>UN71802
ATAATTGGATTTATAATCCACTAAAATAAATAATCAAAACCAAAATAAAAGCTATTCGATACCAACGGTACTTTCCTTTCATGGAAATGTTCCA
ATAATGCGAACTTCCCAATAATAATAATAATAAATAGTCTTGAAAATGATTTTGAGGGGAAGAAAAAAAAAACAAAAACAGAACGCAGACGCAC
ATCTCTATCTCTCTAATGCCACAACTTCATACAGAATCCAGACTTGACAACCGCAGACGCGCCACCTCCAACCGCAAAACAACGCTTAGCCAAA
ACGTGGTCGTTGAAAGTATGAACAAGCTGCTCAGCTAAATCCATAGGATCATCACTAAACGTATCAATGAATATCTTCACAACTCTAACCTCTT
GTGGCGTCGCTCTTAAACCGTACCAAGTCAAAAACTTCTGTCTGAACTCCTTATCAATGTGTCCTAAAGACTCGAGCTGTCTTATGACACTCAC
GCAGTGCTTAAAACCAGTGTCTGATCCTCCGTTTGCCGAGTGATGATCACCGTTTTCTTTAACCGGTTTACCGTTTCTCGCTTGACGGTTCTTG
GTTTGGTCCGACCTGAAGGGAGTGATGGGCAAACTAGCATCTGAACTGTTCCGGTTACTGACAAGATTGGTCGTAGTAACCGGGACTGGAGCTT
CTTCCTCATCCAACAACACACTCCCTTCAACGTTCTTCTCCGTCTCCACAACGCTAGAGTCTTGTTTGTTGTTGTTCTGTAAGAGATTCTGAGG
AGCAATGTAACCGTTGTTGGACTC |
Primers for UN71802 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGAAATGTTCCAATAATGCG |
60.686 |
21 |
GCGGTTGTCAAGTCTGGATT |
60.119 |
20 |
161 |
82 |
242 |
| 2 |
TGGAAATGTTCCAATAATGCG |
60.686 |
21 |
ACGACCACGTTTTGGCTAAG |
60.168 |
20 |
211 |
82 |
292 |
| 3 |
TGGAAATGTTCCAATAATGCG |
60.686 |
21 |
ACGTTTTGGCTAAGCGTTGT |
59.813 |
20 |
205 |
82 |
286 |
|
|
