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Simple sequence repeat (SSR)
>UN06128
GGAAGTTCGGTGGTAATAAAGTCTCGCTTCCACTCTCTCTTTTTATCTCCTTCTCCTTCCATTGTTCTTCCCCTTCTCTCCTCTCTCTCTCTTT
CTCTCTCCCGTCCTTCTACTAGGGTTCCGTTCATTTCATCACATTCAATTCTTTCTCCTTTCATCTCAATTCTTCTCTGTTTTTTTATTTATCT
TTAGTAACAATCAGAGGAGAATGGGTTCCTCTAATTCATGGATCAATCATCCATCCGTTTTCTCATCGAGACGATGTCAACAATCCCGATCAGA
TTTGTACATAGGTGGAGGGTACGAGGATCTCGAAGGAGAAGACGAAACAAAGTCGGAGTTTATCTGCCCGTTTTGCGCGGAGTTTTTCGACATT
GTAGGGCTCTGTTGTCACATTGATGAAGAGCATCCTGTTGAGGCCAAGAACGGGGTCTGTCCTGTATGCACAAAGAGGGTGGGATCAGATATCG
TCGGCCATATCACGACGCAACATGCCAACTTTTTTAAGGTGCAGCGAAGGAGAAGGTTGAGAAAAAGTGGTGGATACGGCTCTGCTTATCTCGC
CTTGAAAAAAGAGCTACGGGAAGCTAACTTACAGTCTCTTCTTCTTGGTGGATCTTCAAGATTCACTTCTCCAACCAATATAGAATCTGATCCG
TTGCTGTCATCCTTTATGTTTAGTTCTCCTTCTGCTACTAATGAGTCTGCTAGCAAATTTACTACAAAACTCTCGCAAAAGGAATCTCTCAGAG
AGC |
Primers for UN06128 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTCCATTGTTCTTCCCCT |
60.298 |
20 |
ATCGGGATTGTTGACATCGT |
60.203 |
20 |
224 |
55 |
278 |
| 2 |
CCTTCCATTGTTCTTCCCCT |
60.298 |
20 |
GATCCTCGTACCCTCCACCT |
60.336 |
20 |
257 |
55 |
311 |
| 3 |
CCTTCCATTGTTCTTCCCCT |
60.298 |
20 |
AGATCCTCGTACCCTCCACC |
60.336 |
20 |
258 |
55 |
312 |
|
|
