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Simple sequence repeat (SSR)
>UN71807
GCATAAACATCCCATAAAAAACAGAGTTTATCCTAATTTTACAACAGAGTCTCAGTCTGTCTGAAGAAGCTACATAGATAGCTCATAATATTAG
GGAGACTACAGATAAGATGATTTTAGTGTCCATTGGCGCTGTTCTTCTTGAGCTCATCGTTCTCCTGACGCAGAGCATCGATCCTGGACTGGAG
AATGCTGATCATAGCCTCTGCACTCATCATCTCAAGCTTGAACGTCTCTCTCTCGACAGACATCTGGTGAACCTCCTTCTGGAGATCATTAAGC
TTCTCTTCAGGAGATGGAAGTGGAGCAGGAGGAGGAGGGGGAGAAGCTTCCTTGCGAGGAGGTTGCGCCGGGTTTTCTTTCTTGTCGGAGATGC
CCATGAGTGAGAACTCGAGCAACGCAGAGATGGCGGTGTTGGTGGCAGCTGCAGCGGTTGATGATGAGACTAAGGTTGTTGGTGTGTTGTCGAC
GGTTGTTGTTGTGGACGAACAGTGGTCCTGTGTGGTTCTGGTTGATTCGTTTTGGCGTCTGCGTTTGTATTGGAGGAGAGGCAATGGAGCTTCT
TTGTTGAGAACACATACAGCAGCAGGAGGAGGAGGAGGATGCTCATCTTCCTCTGCTTGCTCACGTTTGAGTGCCTCCTCAGCTTCTTCATCAT
GACGGTTATTGTTGTTGTTATTCTCTTGATGATTCTGATGGTTGACTTCGTATCCATTTGGGTTGTCTCTCTTGGTGGCTCGTTGA |
Primers for UN71807 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATTGGAGGAGAGGCAATGG |
60.029 |
20 |
ATGAAGAAGCTGAGGAGGCA |
60.096 |
20 |
118 |
538 |
655 |
2 |
TGTTGTGGACGAACAGTGGT |
60.047 |
20 |
ATGAAGAAGCTGAGGAGGCA |
60.096 |
20 |
179 |
477 |
655 |
3 |
TTGTCGACGGTTGTTGTTGT |
60.049 |
20 |
ATGAAGAAGCTGAGGAGGCA |
60.096 |
20 |
193 |
463 |
655 |
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