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Simple sequence repeat (SSR)
>UN72100
GGAGCAATATCATTTCAACCTTATCCTCCTCTACTCAAAAAGACATTCACGGCGATGGCGTCGCTTCTACTCGGAGCTCCTCCGCGAGTCACCA
CCGTCCCATCATCTCCGAGGCTATCATCATCTCACTCTGAAACTCTCGGCGTCTCTCTCTCTCGCTTCGCTCAGCAACTGTCTCTCTCTGCTTC
GTCATCATCCATCTCAGTTCCACTTGTGTACTGTGGCCGAGGTGACCGCAAAACGGCGAGAGGAAAGCGCTTTAATCACTCTTTCGGGAATGCG
AGGCCAAGGAACAAGAATAAAGGAAGAGGTCCCAGAGAGTTCCTGTCCCTCCTGCTCCACCGAGGAAGGATAAGTTTGAGAACGACGAGAAGAT
CAAAATCGACATCGACGAGTCCCTCTTCTCCAACTAGAGTCTTTCCTTCACTTCTTCTCACTGTAATTCTATTCGAATAGATGCTGCAACTCTT
TGTTTCTTGTTAAACATCTCCTCTTTCTATGGAAAAATCTGCTTTCTTGTTTCGGTAATATGAGTGATTGAGTCTTAACTTCGTTTTATAAAAG
AAAAAATCTAAAAGAAAGTGTAGACATTGAAAGATTTAAAAAAA |
Primers for UN72100 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCATCATCTCCGAGGCTATC |
59.611 |
20 |
TGGATGATGACGAAGCAGAG |
59.942 |
20 |
100 |
100 |
199 |
| 2 |
AAAAAGACATTCACGGCGAT |
59.574 |
20 |
TGGATGATGACGAAGCAGAG |
59.942 |
20 |
163 |
37 |
199 |
| 3 |
CCATCATCTCCGAGGCTATC |
59.611 |
20 |
AGGGACAGGAACTCTCTGGG |
60.638 |
20 |
233 |
100 |
332 |
|
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