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Simple sequence repeat (SSR)
>UN06178
GCTCTGAAGTGGAATCTTTAACTGTGCCTTTTGTCTAACTTTATCAGTCACCAAGATCGATTTCTCTGTTTTTATAAATTTCTACTAATAAACA
TAAAACAGTAAAAACATACATCAGGAAAGCTTTCCAAGTAAAAATCTTGCAAGACTAAGGATGCTTCAGTGGTCATCAATAGTCGCTTACTACG
AGATTATGCTTTGTTTCAGCATCAACGTTGGAGAACGCTGTCTCTTGAAGTAAACTTGTCTCCATGTAATGTGATTTTCCAGCAGTCGAGTTGG
ATGATGAAGACAGAAGGCTTCTTCGGTACAACTCGAAGTTTATCTTCTCTTGTGATTATTCCAAATGTTTGGGATGTCTCGCGGATCATTATGC
CTTGTACACCAGTGAATGATGCAATCTTGCATTCAGCAACAAACATGAAAGCACCGTGAAGATCTGCTGATAGAAGAGTTGAGGTTAGCTGAGC
CTTCCCGGTCACCTTGATGAGTTTCATCATGTAACTTTCCCACATACCATGCATCGGCTTATACAAATCAAACTTTTGGAGATCCTGTGGCAAA
TTCAAAGCACCAGATTTCTTGAGCCGCCTCATAGACATGCGGGTTTTAGAACGTTTAGAGTTCATCAGCGATGCTTTGGTAGAACCGGAGGAAC
GTGACTGTACAAAATTGTCAAGAAGGATGTAGTTGTTCTCCTCCACCTTCTTCTCATTTTTACCTTGCAAGTACTTTTGAGCAGAGTCACCGCT
TCGGAGGAGAGTATGCGAAACCTTGTCAGCTATATTTTTCTTTCCACTAGACAACTTAACATTGGTTGCCAACAACTTGTCGTCAACGGGATAA
GACAACTTTATATACGCAGCAAAACCATCATCCTGGGGATCTTTTGTAATTGGTTTCTTTGGAAGAGGAGTAGGAGGCAGTGAGTGAGCTTTAA
GTGGTTGTTTAGAAGAAGAGACATTGGCATCATCAGAAGCTCCCTTCTTGTCTTTATCATTCTTTTGTTGTTGTTGTTGTTGTTGACGAAGCTG
ATCTTTTTGAAGTCTTTGTTGGATAGCATCCATTGAACGTTTTCTCGGATCATGAACAACCGTCTCTGTAGCCATTTGCAAGCCCAGATGAAAA
CACCAAACCTTATTAATCGTCGATGCACGGCGAGCTACTGACCTGAGTTTCTATCGGCCGGAAGAGAGAGTAAACGGAAGGAAAAGTTTATTTT
TTTATGAAGTCCC |
Primers for UN06178 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGAAGAGGAGTAGGAGGCA |
59.943 |
20 |
TGCAAATGGCTACAGAGACG |
60.011 |
20 |
209 |
906 |
1114 |
2 |
TACGCAGCAAAACCATCATC |
59.694 |
20 |
TGCAAATGGCTACAGAGACG |
60.011 |
20 |
256 |
859 |
1114 |
3 |
GGAGGCAGTGAGTGAGCTTT |
59.604 |
20 |
TGCAAATGGCTACAGAGACG |
60.011 |
20 |
196 |
919 |
1114 |
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