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Simple sequence repeat (SSR)
>UN06338
GACCTTGATTACTCTGATACTATTGCAGACAAGTATCCCAAGGTGGAGTTTAGTTCCCTCGTTGAAGCTAGACTAGACCTTCGAACGAAAAAAG
ATCAGATTATGAAGGCAAAGTTTTCAAATGACGACAGATCACCTCCGGAAGAGATGGTTGGTAATGCAACTAATTTTCTTAAGGGAATATGCAA
TGTTCAGATCCTTTACTTGTCTGATGACACTCTTGAGGTACTTACCTACTGTTGTAAACCAATACCAGCATTCAACAACCTGATTCACTTAACC
ATTAAGACAGACCCAGATGTAGCTTGGGAGTCACTACCGGCCCTACTCAAGAATTGTCCAAAACTTGAAACCCTTGTCTTTGAAGGACTCCATC
ACAAATTTGCAAACTGTTGGGAAGAGGACAAGTGCTTGTGCAATCTTTGGATGGCGGACATTTTTACTTGCCTATCATCAAGTCCAGTGAAGGT
TCTAAAGATATTAAAATTTGGAGAAATCTTTGGTGATGATGAGGACATAGTGGAGCAGATAAACCATGTGCAACACTTCCTAGAGACGATGCCG
AATCTTGAACAACTTGTATTGTATTATGAAACATCTTTTGACGAAGATGTGAATGAAGTGTCAGCACAACTTCAGTGGCATCCTAAAGTAGCTT
CACCCAAGTGCAAGATTACAGTGATCTCTGAAACCATTGCTTATCATTTACTGTGCCATGTTCCGTAGTGAGAAAATGGGGTCGTCTTCTTTAG
AAAGGACTTGTGTTGTTATGTTTTGTCTTTTCGCCCAGCAATGGTTGTTAGTCTAAGTCTTGTCTATGCTTTTTTTTTTTTTTTTGTTTTTTTG
TTCAACAGTCTTGTCTATGCTCTTTCTTGTTATTCATGCTGATGATATATGCTTAAGTTTGCTAAACCCGTCTAGTAACACTCCAACCAAGCTC
TCTCATGTAATGCTGTAAATTGTTCAATTCAAAAAAACTTCTGTTTTCAAAATGATTTGTTTTTCCTCGCTCGGTGTCTTACTGTTTCAGCTTC
TCTCAGTATGCATTTTACTTTAACCACATTGGTCAGGCGCGAGTTGTATGAAAAAATAATTGAATTCAAGAACCAAAATTGTGGACCGGTCTCA
CTCACCACTTATACGACGTCGTGTAACGTTGGAATACCCATCCCGCCACATTGATATCTCTCTCACTCACTCACTCACTGACGGCAACCATAAA
GAAACCCTACTTTTCATTTTCATGGTTCCTCCCACCACCACCACCATCCCCCTCATGTAAGTTTCTTCTTCCTCCTCCTCCCGCAATTAAATTA
AAAAACAGGACTTTTGTACTGTTTCGCAATTAGACAATGTCGTTCTGAAAAAAAAAACCCTATTGGTTCTTGTACTTGTTTCAGGTTGTAAGTC
TTGTCTGATCTCATGTCCGAAAAAAGAAGAAGATGGAGGATATGTCCAACCGTCTGCCAAACCCTCTGATATCGCACATACTCTCTTTCCTACC
GACAAA |
Primers for UN06338 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCACTGACGGCAACCATAAA |
60.111 |
20 |
GGGAGGAGGAGGAAGAAGAA |
59.749 |
20 |
102 |
1203 |
1304 |
2 |
TCACTGACGGCAACCATAAA |
60.111 |
20 |
AATTTAATTGCGGGAGGAGG |
60.272 |
20 |
113 |
1203 |
1315 |
3 |
GACCGGTCTCACTCACCACT |
60.161 |
20 |
GGGAGGAGGAGGAAGAAGAA |
59.749 |
20 |
187 |
1118 |
1304 |
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