Simple sequence repeat (SSR)
>UN76013
GGCACCATCGATTTCCCCGAGTTCTTGAACCTCATGGCTCGTAAGATGAATGACACCGACTCCGAGGAAGAGCTCAAGGAAGCTTTCCGTGTTT
TCGACAAGGACCAGAACGGTTTCATCTCGGCTGCCGAGCTCCGCCACGTGATGACAAACTTAGGCGAGAAGCTCACGGATGAAGAGGTCGATGA
GATGATCAAGGAAGTTGATGTTGATGGCGATGGTCAGATTAACTCGAGGAGTTTGTTAAGGTCATGATGGCTAAGTGATGTGCTTTTGGTTTTG
GTTTGCCTCTCTCTCTCTCCTACTAAAAACTCTTTTATGTAATTCTTATATTTACTTATGTATGTTGTTAAATTTTTATTCATGGGACTCGGTT
CTGTTTTCTGGTTGTTTTAAGACCAAATGCCATCTATTTTATGCTTTGTGTCTGAAGTCTTGTCTTTTGTTTTGTTTTGTAATTGTGTAACTTC
GTCTAGTTTGGTGGTTTCTTGTTAATTCTAGTAATGTATAAGAAGTTGAATTCTACGCACATTCACTATGCTCAGCTCCAAATGTAG |
Primers for UN76013 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGATGGCGATGGTCAGATTA |
60.033 |
20 |
CAGAACCGAGTCCCATGAAT |
59.927 |
20 |
170 |
210 |
379 |
| 2 |
TGATGGCGATGGTCAGATTA |
60.033 |
20 |
GAAAACAGAACCGAGTCCCA |
60.088 |
20 |
175 |
210 |
384 |
| 3 |
GAAGCTCACGGATGAAGAGG |
59.95 |
20 |
CAGAACCGAGTCCCATGAAT |
59.927 |
20 |
218 |
162 |
379 |
|
|
