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Simple sequence repeat (SSR)
>UN76479
TCTATATTTATAAAAACAAGCTTTGTATCCTCCATGTTCATCAATCAAAGGAAACAAGAACACAAATGAAGAAGAAGAAGAAAAAAGAATGGTA
AAAGAGTTTATATTACTAAGGCAACAACTGGAGGTTCTGTCTCAAAACGGTTTTTGTTGTTCTAATTGTTGGGTTTGGAGGAAGAAGACGATGA
CTTTCTGTTTTTCGCAAAGTCAACCAGGTCTTTGAAAAGGATATCCTCTGGTTTATCATCCTTCTTTGGTGGTGTAGCAGCAGCAGCAGCAGAA
GCAGAGGCGGTTGGATTCAAAGAAAGATTCCGGGACTCCCCACGAGATCATCATAAAAGGAATCAAAGCCACTGCTTGTGCGTTGAGGAACATT
GCTATGATGCTGAGAGTATTGTTGCCTCTGGCTGGTTCTAACAGACGTTGGTGGTGGTGGAAAAGCCCTGGTTCCTTCAGGATCCCATGGAGCA
CGAGGTAACTGCTCAGTTTGGTCGTCATAAACTGGTTTTGTGAACAAAGCTTGCTCAGGAGATTTGCTCCGGGGAGGAGCTGGATCGTCGAAAA
CAGGAGCAGAAGCGGCTCGGTCGGATGAATATGAATGGGAACTACTCGGTGTCTTTGAAGTCTCTGAGGCTCCTCCTTGAGGTGTGTAGACATC
ACCACTGAGGAAGTCCATGGCGCCAGATTCAACATGTACTGGCCTCATTGTAGGTGGTGGAGGAGGAAGAAGAGGGTTGAAACTTCCTTG |
Primers for UN76479 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCATGTTCATCAATCAAAGGAA |
59.801 |
22 |
AAGACCTGGTTGACTTTGCG |
60.291 |
20 |
189 |
32 |
220 |
2 |
CCATGTTCATCAATCAAAGGAA |
59.801 |
22 |
CTTTCTTTGAATCCAACCGC |
59.685 |
20 |
277 |
32 |
308 |
3 |
CCATGTTCATCAATCAAAGGAA |
59.801 |
22 |
TCTTCTTCCTCCAAACCCAA |
59.641 |
20 |
151 |
32 |
182 |
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