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Simple sequence repeat (SSR)
>UN06386
CTAACACAGGGGTTTACTGCACACGCTCAGAAGTCAGAACTGTCTCAATCATAAAGACCAAGCGGGTCCCGAGCTAATGTGTCTGGTGAAAACA
TTTATAACTCTCAGAGACCCTACAAATAATTTTGGCAATTGGGTTTTTCTTATAAGAACTAAACATTGTTAAGTAATAATAAACCGACGTAAAT
TCTATGAAAAAAGATTGGGTTCCAAGGAGATAAAAAGAAAGACACAACATACTGGCCTCATTCACATCTGTACGTTGCTCAGACGGCAGTGTGA
GTTCCAAGCTGAGTCCGCCCGATATGCGACAACCGCGACGTTATCAAAGGAGCTTCCTCATCAATAAGCTCTATTCCTCTGGGGCTCTCTCCAT
CCGACGAGCTCTTCGCCTTCCAATCCTTGGTGATTCGATCTGGGAGGCTATCAGTGATTGGTTGAGTCGCTTTCACATCTTTAATTTTTATGTA
ATTGTACATTACAACCCCACAGAGTGCTATTGCGTATCCGATAATGTTGAGACCAGTGATGGTGGATTCAGGGAATATGACAGTGGAGAGGGCT
ATGAGAATCCAGTCTTTGAGAACGCCAGCAACCCTGATGGTTACTGCTCCCGTTCTTCCGATGACTAAGAATATGGAGAAGTTTAAGGCAAGTG
CGCAGAGAGCGTTAGAGAAGAAGATCCAGAAGTTGAATTGGATCTGAGAGACTTCTATGTTTGGTTTCTCCAGTACATACCAAGGCAAGGACAG
GAAAACAAAGCTGCAAGGGGCTATATAGTATAAGCTGGTGACAGGGTTTAGCGTCAAGCCCTTTTTCTGAAGAAGAACTTGAGTTAGGACCAGT
CTAAGTGCTTCAGCAAAGATGCCGGTGACCTGGTAGACGGTCCCGATTACGTTGAAATTAATTTCGCCATAGGAGGAACCCACAACTCCAACAC
TGACCAGAAGCATGTTCATGAACACGTCGCACCTTGCTTTGTCAGTGCCACAAACAACGGCCATGATAAAGGTTGCTACAGGCATGAGTGCTTT
GAGCATCTGAATGAAGGCAACAGAGATGTGCAAGTAAGCAGTATTGCCAAACCAGAGGCTGGATGCAAAGAATGCGCTTATAGGTACCACACAT
GTTACGTATATTTCGAATGTCATTTTAACAGGAGAGACAACCTTGAAAACACGAATGAGAAGGAAGGCGACAAAGCCAGAAAAGCCCATGTGGA
TCATAGTCAATGTTATAGGAAGGGGAAAGTTGAAGTATTTGGGAGATAGAACCCACTTGTTGTAGAGAATAACGCCAGAAGAGAGTAGAATGTA
GATGAGTAAGTAGCTGTATGTTAGCAAAAGCGTCTTGTTTATCATCTTTGCCATCGGTAGATAATGCTAGTTGATGCGATAGTCACAGTTGTTT
AATAGTCACAATGCTGACATCATCAAATAACACGGAAGTATCCCGCACTCGCGCAACAGATTTCCCAATGGAAACCAAATCTCAGATATGAGAA
AGCCGAGAAAATGCGAATCTCGGCCTTTGGAACACAAAGCGCGAATCTAGTTTAACATGAGCTACGGATCAGACCAGAGAGATTTAAATTTTCC
GAAGAGAGTGGGTGAGGGAAGAAGATGATGATTAATGCGGACGATGGCGAATCGATGAAGAAGAAGAAGAAGAAGACTTTATTAATTGAAGGAG
GGAAGGGACGTAGAAGTTTTTGTC |
Primers for UN06386 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTTCCGAAGAGAGTGGGTG |
60.224 |
20 |
TTCTACGTCCCTTCCCTCCT |
60.067 |
20 |
115 |
1593 |
1707 |
| 2 |
TTTTCCGAAGAGAGTGGGTG |
60.224 |
20 |
CTTCTACGTCCCTTCCCTCC |
60.067 |
20 |
116 |
1593 |
1708 |
| 3 |
TTTTCCGAAGAGAGTGGGTG |
60.224 |
20 |
TCTACGTCCCTTCCCTCCTT |
60.067 |
20 |
114 |
1593 |
1706 |
|
|
