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Simple sequence repeat (SSR)
>UN06407
TGATGAGCTGCTGCCGTGGTTCTCTCTGAGATCCTTCCTTCCTTGCCCTCTCTTTCTACTCACTCTCGGAACAAGTCCTCTCCAAGTGTTTCAG
CGCGTCAAGAACGTGGTTTGCTTGCCTCCTCTTCTTCTTCAGAAACTATCCCCTTGGTTATTGGTTCTGGCCACGGTACCAGTGCTCCAAGTAC
TAGATTGGTCTCAGATAGGATCTCGCCACCAATTGTTAGTCCTGGTGTTTTCCGCAAACATGTCGAAAGTGAGGAGCAAGTCCAATCTTTAGGA
AAGGTTCCTGACTATGATTTCTTTGCCAAGTCTTTTGATGTTCCCATCCTCCCAGAGGATGATGATCTTAACTCAGTGGTCCACGCTGTCCCAC
AAGAAAACCTCAAGTCTACTAGAGATTTTTGGCAAGAGCTTGGTGGTTCTCATATGACATGGAATCAAACAGATTCAATCACAAGCGTTGGTTC
ACTGAATGCTGCACAGAAGGGATCATGTTTTGAAGTTGGGACTGGGAGTACAAATGACCAGCCGTCAAAGGGTTCACTGGCCAGTGAAAACGGT
GATACTGAATCAAAGCGTTCACTGGCTAGTGTAAATGGTGATACTGAATCAAAGCGTTCATTGGCCTGTGTAAATGGAGATACTGAATTAGGTA
GTGCTTTCAGCTCATCAACTCATGGCTGCAGTGTTGATCACCTTGAAGAGATTTTCCAAGACGCCAAAACTAACAAGAGAACCTTGCTCGCTGT
GATGGACTTGGTTATGAATCTGATGAAAGAAGTTGAACTTGAAGAGAAGGATGCAGATAAGTCAGAGTTAGAAGCTGCTAGGGGAGGTTTGGAC
ACTCTTGAAAAGGTTGAGGAGTTCAGGAAGATGCTGAAACATGCCAAGGAAGCCAATGACATGCATGCTGGAGAAGTATATGGAGAGAAGTCAA
TTTTAGCAACTGAAGCAAAGGAGCTTGAAAACCGATTGCTCAAGTTATCAGAAGAGCGAAGCAAATCTCTTGATGTACTTGATGAGATGCGTGA
AACTCTTGAGATAAGACTAGCGGCAACATTGGAGATGAAAAAGGCTGCTGAGCAAGAAAAGAAAGCAAAAGAAGACTCTGCGCTTAAGGCACTT
GCTGAACAAGAGGCCATCATGGAGAAAGTAGCCCAAGAATCAAAGCTTCTTCAGCAAGAGGCAGAGCAAAACTCTAAGCTTCGAGAGTTTCTTA
TGGATCGTGGTGAGGTCGTTGATTCCTTACAAGGAGAAATATCTGTCATATGTCAAGATGTGAAGCTGTTGAAAGAAAAATTTGACAAGAGTGT
GTCAACAACAACAAAATCAGTTACCTCAAGCCTGACTAGTTCACGTGGATCATCATCTATGAGGAGCTTGGTGCTTGAGAATCCTGCTGAGCTG
TTGAATGGAATTTTTGAAACCTCAAGCAAGAACAAGAGCCCAGAAGAAGAAGAAGAAGAAGAAGAAGCATCTTACTACATGAAGAAAGAGAAAA
ATGATCGTAGAGAGCTTCTTGAAGATGGTTGGGACATCTTTGAGAAGGATATTGAACTTTAAGGTGGGGTTGGTGGCTTGGTGATGAAGGAAAG
GGCTGGTATTGAAATAGAAAACGCTATAACCTAGAGAATAAAATGGATTTGTGACCATGTTTGGATCAGGGATTGTATGAGCTTTTGATTCTCT
TGTGTGTTTGAAACCTAAACCAGATCACTTATGAGCTTTAATAGTACTACAGTATAGCTTTGTGCAAGATTTTT |
Primers for UN06407 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGCTGAGCTGTTGAATGGA |
60.136 |
20 |
AATCCCTGATCCAAACATGG |
59.605 |
20 |
273 |
1400 |
1672 |
| 2 |
TCCTGCTGAGCTGTTGAATG |
60.136 |
20 |
AATCCCTGATCCAAACATGG |
59.605 |
20 |
275 |
1398 |
1672 |
| 3 |
CTGCTGAGCTGTTGAATGGA |
60.136 |
20 |
TCCCTGATCCAAACATGGTC |
60.725 |
20 |
271 |
1400 |
1670 |
|
|
