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Simple sequence repeat (SSR)
>UN06413
GGACATAAATTGAAGTGGTCTTCAACATCACAGAGCTCCCAAAATCTCACAATTAAAAATAAATGGAAGATCAACAAGGACAACAACAGCAACA
ACAACAACAACAACAGTTCCAGCAACCTCTGGTTGTTTATCCATCTACTTCTTCTTCAACACCTTCCTCTTATGCGCCACCTTCGTCATCTGGT
TCAAGTGGATCATTCGGTACAGCTTTCATAGTTATAGCTGCGATCCTTATCTTAGCAGCACTGGCTTGTGTTTTTGGAAGGTTATGCAACCGCG
GTCCCAAAGAACACAAAAACAAGAACAAAGCATCAAAGCATGAGAAGCCGTCGTCAAAGAAGAGCCGTGAGATCAGACCTGTGGAGCGTGAGCC
AAGAGAGAGAGGTGATGATTTGGAGTCTGGGTTTGATATAAAGCGTCCTGGTCCAATGAGCAAACCTTCTGGCCCTATGAGCAAACCATTTGGT
CGAAATGGTGGAGACATTGAGTTTGGGTTTGATAACAAGAGAGGAGGAGGAGGAAAGAAAGGACCACCTCCGGTTGTTAAACATGGAGTAAGGT
TCCAGTGACTGAAAAAATGGAGGTTCGCTTCAGACACGGTGGTTCGTGCCTCAAGCACCGGTCAGGAGAATGATCTAAATAAGACAAGAGTCTT
ACTCAAGCTTGTTTAGCTTTATCTATTTTTCTTGTTTATTTTCTGTTTGTAGTGTTTCTTGTTTTGGGTCTATTGGTTTTGTTTCATATAAGTA
TGGAACTTTGGGTATTAAGTTATATATGAAATCAAGATGATAAGTA |
Primers for UN06413 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAACATCACAGAGCTCCCAA |
59.831 |
20 |
AAACAACCAGAGGTTGCTGG |
60.149 |
20 |
110 |
23 |
132 |
2 |
CAACATCACAGAGCTCCCAA |
59.831 |
20 |
CACAAGCCAGTGCTGCTAAG |
59.805 |
20 |
236 |
23 |
258 |
3 |
CAACATCACAGAGCTCCCAA |
59.831 |
20 |
CCGAATGATCCACTTGAACC |
60.317 |
20 |
183 |
23 |
205 |
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