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Simple sequence repeat (SSR)
>UN78222
GGGAGATTAAATCGAATGTAAAAAAATATAAAGTTTATCAAAAATCAAATCTCTTTCTATCAGTTTACACGCTTCACATAGACGTATCCTCAGA
GAGTTTTTTCTTTTGTTCTGTTTAATAATAATACAAACCAACAAATATGAAAACGAAAATGACACATTACATAATAGGGATACTGTGATGAATA
GCATCTTCTTCTTCTTCTTCCTCTAGTCAACATGGCCGCAAAGCTTTGATTATGGAATGTATATCTAAAAAGATATACACACCCGTTGTCTTTA
GTTTTGGGATCTTCTGTGCAAACTTGGTTTTAGCCAGCCATCCTAGAAACCGAAGTCGATTGGTTGGCTTCTTATTGGAGGATACGTTACTTGC
TGCCTCCCCGTTGCTGCATTCTCTGTTGGTTTCACTGTTGTTGTAACGGGTTCAGGCGGCGGTGGCTGCGGCATTGTTTGGCTATTACCTTCTG
TGGCGGCTAGAACTGTCTCTGTGTTTGGAGTTGCTGTCTCTGTCACTGGTCCATCAACATGTGCTGCTGTCTCAGCAACAGCTGCAGCTTTCGG
TGCTGCTGATTCAGAATCAGCGGCAGTTTCTCGTGCTTCTGTCTCGGAAACAGCTGCAGTTTTCGGTGCAGCTGAC |
Primers for UN78222 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACGCTTCACATAGACGTATCC |
59.66 |
22 |
TTCGGTTTCTAGGATGGCTG |
60.206 |
20 |
269 |
68 |
336 |
2 |
CACGCTTCACATAGACGTATCC |
59.66 |
22 |
TGGCTGGCTAAAACCAAGTT |
59.747 |
20 |
255 |
68 |
322 |
3 |
CACGCTTCACATAGACGTATCC |
59.66 |
22 |
GATGGCTGGCTAAAACCAAG |
59.708 |
20 |
257 |
68 |
324 |
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