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Simple sequence repeat (SSR)
>UN78380
GGGGTGTCGATTTAGTTCGCTAACTACCGAAGAAGAAACAAGCACCTACCTCTCTCTCTCTCTCTCTCTCAACGCTCAGAAGAAATGGCAAGGA
AGAAGATCAGAGAGTACGACTCAAAGAGACTCGTGAAGGAACACTTCAAAAGGCTTTCCGGTAAAGAACTCCCTATCAGATCCGTTCAGATTAA
CCAAGAGACTGATCTCAATGAGCTAGTTGAGAAGGAGCCATGGCTCTCTTCCGAGAAGCTTGTCGTCAAACCCGACATGTTGTTTGGTAAGCGT
GTCAAGAGCGGTTTGGTTGCCTTGAAACTCGATTTCGCTGAAGTTGTGACCTTTGTCAAAGAGCGCTTAGGCAAAGAGGTGGAGATGAGTGGAT
GCAAAGGACCCATCACAACTTTCATTGTTGAGCCCTTTGTCCCACACAATGAGGAGTTTTATCTCAACATTGTTTCGGATAGGCTTGGCTGCAG
CATTAGCTTTTCTGAGTGTGGAGGGATTGACATCGAGGAGAACTGGGACAAGGTCAAGACCATCTCTGTGCCCACTGGTTCTTCCTTGACACCT
GAGATATGCGCACCTCTTGTTGCTACCCTTCCTCTTGAGATCAAAGGGAACTTGAAGATTTTATTCAAGTTATTTTCACCCTTTTCCAGATCTT
GATTTCACTTTCTTGGAGATGAATCCTTTTGCACTGGTTGATGGGAGCCTTATCCTCTGGATATGAGGGGTGAGCTTGACGACACGCTGCTTCA
AAC |
Primers for UN78380 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGAAGAAGAAACAAGCACC |
59.853 |
20 |
ACCGGAAAGCCTTTTGAAGT |
60.11 |
20 |
130 |
27 |
156 |
2 |
CCGAAGAAGAAACAAGCACC |
59.853 |
20 |
AACCAAACCGCTCTTGACAC |
60.156 |
20 |
274 |
27 |
300 |
3 |
CCGAAGAAGAAACAAGCACC |
59.853 |
20 |
AAGCTTCTCGGAAGAGAGCC |
60.233 |
20 |
223 |
27 |
249 |
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