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Simple sequence repeat (SSR)
>UN78588
GGAATTAAAAACAGAAAGAAAAAAATCAGAACCATTCTTTTTCTCTATCTGTTCGACGCGACGCAACGCGGCTAAGAAGAAGGAGACACGGAGG
AGGAGGAGGAGCAATGGCGAATACGCAGATTTACGGCTTCTCGATCTTCGCAGCACACTGGATCCCTGAAGAAACCGTTAGATCGAAAATTGAT
AAGGATAAGGAGAATACCGAAGACGGCTGCGAGTCTTCGACGTGGACCTCCCGGAGCTGCATCGCGTTGGCAGGCGGAGGCGGAGATGGGGGAC
ACAGGATACCTAACGTCATTGTAATCTGTCGTGTTGGTCTCGAAACCAATTCTCTCTCGGAACAACCTGTCTTCCTTATTGAATGGCTGCTCAT
TCTCGGGAAGGTGGTCTTATCTGCGCATTGCCAGAGAGTTGCAAGTATGTGACTCATTGCTTAAACTCTGTTTTGATGTTTTTGCTGTCTCTGA
TTCAGCAGGAAACAAGACTGACACCATTCAAGCCGAATCAAGCAGAAGAAACGATTTCAAGGAAGGTTAGAGAAACCAAACCTGTCACACTCAT
TTTCTGTTTAGTTTAGACTATGTTTTTGAACTTTGTTTGCTATTAATGTTGACTTGGGCAAGTATGGAATGTTCCTACGAAGTTTGTAATGAAT
TGAATAATA |
Primers for UN78588 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGCGGCTAAGAAGAAGGAG |
61.015 |
20 |
TTTCGAGACCAACACGACAG |
59.873 |
20 |
262 |
66 |
327 |
2 |
ACGCGGCTAAGAAGAAGGAG |
61.015 |
20 |
CAGCCGTCTTCGGTATTCTC |
59.836 |
20 |
152 |
66 |
217 |
3 |
ACGCGGCTAAGAAGAAGGAG |
61.015 |
20 |
TAGGTATCCTGTGTCCCCCA |
60.187 |
20 |
229 |
66 |
294 |
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