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Simple sequence repeat (SSR)
>UN06468
AAGAACGTAATAAATATAGAGGAACAAAATATTGAGATGTAGATCAAAGGAGTATGTTATATGGACACAACACAGAGTCTACGAGAGAGAGGTT
CACAAGCCTCAAAGGAGCATTTTTATTTGGACACCACACAAAAGTCTACGACAGAGAGAGAGAGAGAGAGAGGTTCACAAAAGAGGCAACCATA
TTTTCACAGGGAGACTGAACTAGCATAAACCGTGGAAGACAATTTGATCTTGAATTTGAAGCTGATGCAGGCCAGTCGCCCACCATCCTTGTCG
TTTATCGTCATCTTAAGCGTATAAGTACCGGGGGGTGTAATAGAAGGCAGTGTTTGGGAATGAGAAAGGACAAAGCTGCCAGGTGCAATCGGGC
AGGAAGACTCATCGCAGAGATCGTGTGTTTCGGTATGGACATGAACTCCAAAATATGAAACACTGATCACTACTTTTCCTCCAGAGATGTCTTC
ATCAGTAGAACCAGTGATCTTAAATGTTGCGGCTTCGCCACTCACAACAGGGTCAGGAGAGATCTCCACACCCTTGACTTTAACGGGATCGAGC
CTCTTATCGCAGTTGTGGAAAGAAGTGGCGCGCAAAGAAGGTAAGAGGAAGAGCGAGAAGAGTAGAAGAAGCAGAGGCTGAGCTTGAGAAATCG
CCATGGACGAGTTCGGATTTGACGAAGCTTAGCCGATTTTAATCTCC |
Primers for UN06468 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTTCACAAGCCTCAAAGGA |
60.232 |
20 |
CTCATTCCCAAACACTGCCT |
60.111 |
20 |
256 |
91 |
346 |
2 |
CACAAGCCTCAAAGGAGCAT |
60.397 |
20 |
CTCATTCCCAAACACTGCCT |
60.111 |
20 |
252 |
95 |
346 |
3 |
CACAAGCCTCAAAGGAGCAT |
60.397 |
20 |
CCCCCGGTACTTATACGCTT |
60.217 |
20 |
222 |
95 |
316 |
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