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Simple sequence repeat (SSR)
>UN78812
AAAAACAAAAAATAGTTGTGGCATTTGGTTCAAAAAAGAAAAAAAAAATAGTGGTGGCGATTATCCCATGTAAATTTTATTAACAGATTCAAAA
ACCAAAAGAGAAAATTGAGAGACACCATGTCCTATATTGTTTTCAGCCACGGCCAAAATTAACAAGAAAATGGCAGAAAGAGAGAGAGAGAGAG
ATCATTGAGATCTTTGGAAGCCATATTGGTGATGATTCTGGAGGCTGTGGGCATGAATTATGATCGCGGTGATGACGATTTCTCACAAAATTCC
TTCCCTTGAGAGTTATTCAATTGTTTATAATCACGGTCTGGTTTATCAGTCTCTGACATTTCCTTCTTCACATCAGGTTTGTCGTTAGACAGAG
CCTTTAAAGCAGAACGGCTTGGAGACGGTGAGCTCCTCTGATAATTTGATGAAACAGGTGAAACATAAGGTATGGTCAAGCCCGGGTATGGCAG
CATTGAATGGTCGAAGTTGCAGTCTGGTCCAAACTTGCAGAATCCATAAGACTTGACGTTATTGCAAGCTGGTTGTCCCATGTAAGTGGCCCAG
CTTTGAGGAGGCAAAAGGCCTTGAGAGGGTGACACCATGAGAGGAACATAGGACTGAGGAAGTTGCGGACGA |
Primers for UN78812 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTGGCATTTGGTTCAAAAA |
59.946 |
20 |
CACAGCCTCCAGAATCATCA |
59.787 |
20 |
221 |
17 |
237 |
2 |
TGTGGCATTTGGTTCAAAAA |
59.946 |
20 |
TCATAATTCATGCCCACAGC |
59.504 |
20 |
235 |
17 |
251 |
3 |
TGTGGCATTTGGTTCAAAAA |
59.946 |
20 |
ATAATTCATGCCCACAGCCT |
59.415 |
20 |
233 |
17 |
249 |
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