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Simple sequence repeat (SSR)
>UN06517
GGCCTCTAATTCATCCCCCTTTCTTTCTTCAAACCTACTTTCTCCCAGTTTCGTATCTGATCCGTTAATCGAAGATAGATCCGGCAGTTTTGAG
CTGAATTCGAAAGAAAGAAACAGAGTAATAATGGCGAACAGAGATGTGGAGAGAGAAGGGAAGCAGAACAGCATCAACAACAACAACAACAACA
ACTATTTCTATGACGAAAGCTCCATCGATACTCACTGGACTTCGTGGCTCGTTCCACTGATCGTTGTGGCGAATCTCGCCGTCTTTGTCGCCGT
TATGTTCGTTAACGACTGTCCCAAGAAGATCAACGGACCAAACAAAGCTTGCGTCACTAGATTCCTCGGAAGATTCTCGTTTCAGCCACTTAGA
GAGAATCCTCTCTTTGGCCCTTCTTCTTCTACATTGGAGAAAATGGGAGCATTGGAGTGGAGGAAAGTAGTACATGAGCATCAAGGGTGGAGAC
TCGTCACTTGTATGTGGCTACACGCTGGTATCATTCATCTTCTCGCCAATATGTTGAGTTTGATCTTCATCGGTATCCGCCTTGAGCAGCAGTT
TGGCTTCATAAGAGTCGGGCTTATCTACTTAATCTCTGGTCTCGGTGGAAGCATACTCTCGTCTCTTTTCCTCCAAGAAAGTATCTCTGTTGGT
GCTTCCGGTGCTCTCTTTGGACTTCTTGGAGCAATGCTATCCGAGCTTCTCACTAATTGGACTATCTATGCCAACAAGGCGGCTGCTCTGTTCA
CACTCCTATTCATCATAGCAATCAACTTAGGACTAGGCTTGCTTCCTCGCGTTGACAATTTTGCACATATCGGCGGGTTTATAACCGGGTTCTG
CCTCGGTTTTATCCTCCTTATCCGGCCACAGCACGGTTGGGAAAGTTCCCGCACCAACACTACTTCCCTTACCAAACGCAAGTATAGCATCTAC
CAGTACGTTCTGTTCTTCGTTGCGGCCCTTATACTTGTGGTTTGTTTAGCCGTTGGATCAGTGATGCTTTTCAAAGGAGAGAATGGTAACAAAC
ATTGCAAATGGTGTCATCGCCTCAGCTGTTTCCCTACTTCTAAATGGACCTGTTAATCATCGTCATCACCATCATCATCATTATCCTCTAAAAC
TATTATATGTGTTCTTGTAACAGATAATTTGTTTGTTCTTTTTGCCTTTGTCCTCTCTTATACCTTTTATAACATACATGTACATTACTAAATT
TGTCGTGTAAAAAAGGGGAAAGAAACAAAAGAGTGTATTACATTTAAAAATTAGAAGTACATAAAACAGTATTGTTGGATTGAAGGTACTTAAT
CTCATTATAGTACTTCATTTATAT |
Primers for UN06517 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGAAGATAGATCCGGCAGT |
59.797 |
20 |
GCTTTGTTTGGTCCGTTGAT |
59.978 |
20 |
262 |
69 |
330 |
2 |
TCGAAGATAGATCCGGCAGT |
59.797 |
20 |
TCCGTTGATCTTCTTGGGAC |
60.05 |
20 |
251 |
69 |
319 |
3 |
TCGAAGATAGATCCGGCAGT |
59.797 |
20 |
GTCCGTTGATCTTCTTGGGA |
60.05 |
20 |
252 |
69 |
320 |
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