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Simple sequence repeat (SSR)
>UN79899
GGAGAGTAGAGAGGACTTCCTTTGATCGGATTCTCTGGCCTTTCCTCGTCGGAGGTTCTTTATTCTAACTTGTGAGGAGCAACATAGAGAGAGA
CAAAGATAATACTTGTTGGGGGGGGTTTTGTGTATCATGTCAAGTTTGCTATACTGCCGACGCTTTCTCTTGACATCTTCTTCTTCTTCTGCTT
CGATTCACTCATCTTCCATTTCGTCGTTTCTACTGAATAGTAGTATAAGAAGAAGAACATTTTGTTCTTCAGCCTCCGACACGAAGAAAACAGA
GGATGCCAAAAGAAAGAGACCACCACCTTTGAAATCCTTCACCGTAAACTATCTCGTGAACTCATGTGGGTTGTCCTTGGAATCCGCCAAATCT
CGGTCTAGATTCGTAAAGCTTTCATCTTCCAAGAGACCAGACTCTGTCCTCGCTCTCCTCAAGAACCATGGCTTCACCTTCGAACAGATCACCA
GAGTCGTCAAATCATTCCCTACTATCCTCATAGTCAACCCCGACGAAGTTCTCTCGCCAAAGCTCTTGTTTTTCCGTTCGATCGGGCTATCCAG
CGTTGACACAGCGAAACTGATATCAAACTGTCCCACCACGCTCTCCCTTAGCTTGCACAACAGGCTCATCCCTTGCTATGATTCCCTCAAGAGC
ATACTCGTGGAGAAGAGAGTATCCTCAAGTGTTTGAGACGGGGTACTGGATCTTCACGTTGGACACTGTCAGTACTTGGCTGCA |
Primers for UN79899 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTATACTGCCGACGCTTTC |
60.01 |
20 |
GGCATCCTCTGTTTTCTTCG |
59.813 |
20 |
148 |
142 |
289 |
2 |
TACTGCCGACGCTTTCTCTT |
60.154 |
20 |
GGCATCCTCTGTTTTCTTCG |
59.813 |
20 |
144 |
146 |
289 |
3 |
GGATTCTCTGGCCTTTCCTC |
60.154 |
20 |
GGCATCCTCTGTTTTCTTCG |
59.813 |
20 |
262 |
28 |
289 |
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