 |
Simple sequence repeat (SSR)
>UN00643
TCTTTATTATAAAAAAGCGTTTTAAAAACATTAAAAATCAGATTCAGTTACTAGTACACACCAAGAACGCATAAACCCAACTTTTAGAAACTCT
CTCACAAATCATTCATTAGATTCTACCCATCAAGATTCAAATGCAAAGTTAGCCTCCAAAATTAAGTCAACCCTCTTCCAGTCTCACCCAATTT
TGACAATAAAATTAGGACAAAAAACTGAAAAAGATGAAATCTATTTCAAGAGCAAACTGGACAGAGAACCAAACCGTTCTCATTACACTCCAAG
CACTTAACCGTATCCTTCTTCTCAGCATCCATAACCTTGCAGCTTCCATTACAAACACCACACATCACAAGCCTCATCCCACCGCATCCTCCGC
AGCAGCAACCGCTTAGCCTCGCCTTAGGCATACATTCAAGCAAAATACCCAATTTGCCCTCCTCCTCTAACCTCACCACTTCCTCAACGCTTCC
TATCATCCTCCCCTTCACGAAAACCGCCGGCACTCTCACCTGCTTCGTCCCCATGATCCCCCTGATCTCCTCCTTGAAAACAGAGTGCATCGAC
ACATCTCGCTCCAAGTACCGAACTTCGTGCGAATCCAGTATCGATCTCACCGCATTGCAATCCTCGAACGTCTTCCTTATCCCTCTCAGCGTCG
TTATGTAAACGACCACCGAGTTCTCTCCTCCCGGTGGACATTTCTCCGGGAAACTCTCGAGGATTCTCTCGTTGGAGGAGGGTGGAGAGATCAC
CATCTTGATCTGTTCTTTCTCGTGAGACAACTCTCTCTCGTAAAATGCCACGAGGTCTGGATCGAACATCGGACTGAAACTCTTCCTCCTCAAA
GGCTCTTCTGATCTGAGAGGGAAACTCAAACGCATCACGCCTCTCTTCGGAGTCTCCTCGAGAACGTTCTTCTTCTGGTTCGGACTCACTCCTC
TGTTTTCTTTTCCCCTGAATCTCTTGCTACTACTACCGTTCCTCTTCGGAGACTCCGCAACCGATTTCACCGGAGTCTTCCATGATTTCCCGAA
TATTCCGCGAGATTTGGGGCTTATCTTCGTTGAATCTTCGAGATCTTCCATAAGCTCCCATGTGTTGATTATCTCTGGATTATCACTAGATCTC
CTTGGTTTGATGGTTTCGGACTCAAAGACATCGCCTTTAGTGAGTTCCTGTGACTTAGAAGAAGTCTCTTCTCGTTGGTTGATGTCGAGATGAC
CGTAAGTAGTGGAAGTGAGAGAGACGATGTGGTCGCCGCCGTTGTTGACTCGAATCTCTCTTACCAGTTTCTTCTTCGCTGGCTTCGAAGAAAC
ACAACCCACCTTTCCCGCTCTCTCTCTCTCTCTCGATTTTGACTGTGGAAGTTTTCTTTTTGGGGAAGAACTGAGATTCC |
Primers for UN00643 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGAGAGAGACGATGTGGTCG |
59.98 |
20 |
GGAATCTCAGTTCTTCCCCA |
59.065 |
20 |
159 |
1238 |
1396 |
| 2 |
TGAGAGAGACGATGTGGTCG |
59.98 |
20 |
CCCCAAAAAGAAAACTTCCA |
59.037 |
20 |
144 |
1238 |
1381 |
| 3 |
TCTCGTTGGTTGATGTCGAG |
59.831 |
20 |
GGAATCTCAGTTCTTCCCCA |
59.065 |
20 |
199 |
1198 |
1396 |
|
|
